Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi390g00004 ATGGCTGCATATCAGGAAGAAGTGAAGCTTTTGGGAGTTGTGGAAAGCGCATTTGTGTGCAGGGTGCAAATTGCTCTAAAGTTGAAGGGAGTTGAATATAAATTTGTGGAAGAAAAATTGGACAACAAGAGTGATATTCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTGCTTGTTCACAATGACAAGCCCATATCAGAGTCCCTTGTGATTCTTGAGTATATTGATGAGACATGGAAAGACAACCTCATCTTGCCTGCTGAACCATACCAAAGAGCCTTGGCTCGTTTCTGGTCCAAGTTCATAGATGACAAGTGCTTGGCTGCTCTAGTGAAAGCGGCTTTCACCAATGATGAGAAAGAGCGTGAGAAGGGTGTTGAGGAATCAGATGTGGCTCTGCAGTTCCTTGAGGATGAGCTCAAGGACAAGTTCTTTGGTGGTGAGGAGTTTGGCTTGGTGGACATAGCTGCTGTCCTCATAGCTTTTTGGTTTCCTATAGTTCAAGAAGTAGTAGGGTTGCAATTGTTCACCAGTGAGAAATTTCCCAAACTCTACAAATGGAGCCAAGAATTTATGAACCAGCCTGTTGTTAAGGAATCCCTACCCTCAAGAGATAACTTCATAAATATTTGTTGAAGTCAAGTGAACTGAAGTAGCTCAATGGCTACATATCAGGAAGAGGTGACGCTTTTGGGAACTTTGGGAAGCCCATTTGTGTGCAGAGTGCAGATTGCTCTTAATTTGAAGGGAGTTGAATATAAATTTGTGGAAGAAAAGTTGGACAGCAAGAGTGATGTGCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTGCTTGTTCACAATGAGAAGCCCATATCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGACATGGAAACACAACCCCATCTTGCCTGCTGAACCTTACCAAAGAGCATTTACTCGTTTCTGGTCTAAGTTCATAGATGACAAGTGCTTGGCTGCTGCATTGAAAGCTGCTTTCACCATTGATGAGAAAGAGCGTGAGAAGGGTGTTGAAGAATCATATGAGGCTCTGCAGTTTCTTGAGGATGAGCTCAAGGACAAGTTCTTTGGTGGTGAGAAATTTGGCTTCGTTGATATTACTGCTGTTTTCATAGCCTTTTGGATCCCTATTTTTCAAGAAGTAACAGGGCTGCAATTGTTCACCAATGAGAAATTTCCCAAGCTCTACAAATGGAGCCAAGAATTTATCAACGACCCTGTTGTTAAGGAATCCCTGCCTCCCAGAGAACTACTCTTTGCCTTTCTCAAAGCTCGCTATGAAAGTCTTGCTGCTTCAAAGTAG 1341 0.4265 MAAYQEEVKLLGVVESAFVCRVQIALKLKGVEYKFVEEKLDNKSDILLKYNPVYKKVPVLVHNDKPISESLVILEYIDETWKDNLILPAEPYQRALARFWSKFIDDKCLAALVKAAFTNDEKEREKGVEESDVALQFLEDELKDKFFGGEEFGLVDIAAVLIAFWFPIVQEVVGLQLFTSEKFPKLYKWSQEFMNQPVVKESLPSRDNFINICXSQVNXSSSMATYQEEVTLLGTLGSPFVCRVQIALNLKGVEYKFVEEKLDSKSDVLLKYNPVYKKVPVLVHNEKPISESLVILEYIDETWKHNPILPAEPYQRAFTRFWSKFIDDKCLAAALKAAFTIDEKEREKGVEESYEALQFLEDELKDKFFGGEKFGFVDITAVFIAFWIPIFQEVTGLQLFTNEKFPKLYKWSQEFINDPVVKESLPPRELLFAFLKARYESLAASK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi390g00004 446 FunFam Tau class glutathione S-transferase 87 223 - -
Gabi390g00004 446 SFLD Main.3: Omega- and Tau-like 5 216 IPR045073 -
Gabi390g00004 446 SFLD Main.3: Omega- and Tau-like 227 445 IPR045073 -
Gabi390g00004 446 CDD GST_C_Tau 91 207 IPR045074 GO:0004364|GO:0006749
Gabi390g00004 446 FunFam Glutathione S-transferase GSTU6 225 309 - -
Gabi390g00004 446 CDD GST_N_Tau 8 81 - -
Gabi390g00004 446 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 312 439 IPR010987 -
Gabi390g00004 446 Gene3D - 90 222 - -
Gabi390g00004 446 Gene3D - 312 446 - -
Gabi390g00004 446 Pfam Glutathione S-transferase, C-terminal domain 338 419 IPR004046 -
Gabi390g00004 446 Pfam Glutathione S-transferase, C-terminal domain 113 197 IPR004046 -
Gabi390g00004 446 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Gabi390g00004 446 Pfam Glutathione S-transferase, N-terminal domain 229 301 IPR004045 -
Gabi390g00004 446 FunFam Tau class glutathione S-transferase 1 89 - -
Gabi390g00004 446 FunFam Tau class glutathione S-transferase 309 445 - -
Gabi390g00004 446 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 233 429 IPR045073 -
Gabi390g00004 446 SFLD Main (cytGST) 227 445 - -
Gabi390g00004 446 SFLD Main (cytGST) 5 216 - -
Gabi390g00004 446 SUPERFAMILY GST C-terminal domain-like 79 211 IPR036282 -
Gabi390g00004 446 SUPERFAMILY GST C-terminal domain-like 301 440 IPR036282 -
Gabi390g00004 446 CDD GST_C_Tau 313 438 IPR045074 GO:0004364|GO:0006749
Gabi390g00004 446 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 228 307 IPR004045 -
Gabi390g00004 446 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Gabi390g00004 446 SUPERFAMILY Thioredoxin-like 230 330 IPR036249 -
Gabi390g00004 446 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Gabi390g00004 446 Gene3D Glutaredoxin 223 311 - -
Gabi390g00004 446 Gene3D Glutaredoxin 1 89 - -
Gabi390g00004 446 CDD GST_N_Tau 230 303 - -
Gabi390g00004 446 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi390g00004 Gabi-Chr390 128404 137891 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi390g00004 227 445 Glutathione S-transferase Gene Family AT3G09270 52.703 1.43e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi390g00004 K00799 - egt:105969932 435.261