Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi390g00002 ATGGCTGCTAGTCAGGAAGAGGTAAAGCTTTTTGGAGTTGTGGGAAGCCCATTTGTGTGCAGGGCGCAAATTGCTCTTCAGTTGAAGGGAGTTGAATACAAATTTGTGGAAGAAAAGTTGAACAACATGAGTGATCTTCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTGTTTGTTCATAATGACAAGCCCATATCAGAGTCCCTTGTGATTGTTGAGTACATCGATGAGACATGGAAACACAACTCCATCTTGCCTACTGAACCTTACCAAAGAGCCTTGGCTCGTTTTTGGTCCAAGTTCATAGATGACAAGTGCGTGGCAGCTGCATGGAAAGCTGCTTTTACCGTAGATGAGAAAGAGCGCGAGAAAGCTGTTGAAGAATTATTTGAGGCTCTAAAGTTTCTTGAGAATGAGCTCAAGAACAAGTTCTTTGGAGGAAATGAGTTTGGCCTTGTGGATATTGCTGCTGTTTTCATCCCTATAGTTCAAGAAGTAGCAGGGTTGCAATTGTTCACCGCTGAGAAATTTCCCAAGCTCTACAAATGGAGCCAAGATTTTCATAGCCATCCAGTTGTCAAAGAAAATATGCCTCCTAAAGACCAACTTTTTGCCCAAAGTCTAAACAAAATTAATACCTCAATGGCTACATATCAGGAAGAGGTGAAGCTTTTGGGAATTGTGGGAAGCCCATTTGTGTGCAGAGTGCAGATTGCGCTCAATTTGAAGGGAATTGAATACAAATATCTGGAAGAAAAGTTTGATAACAAGAGTGATGTGCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTGCTTGTTCACAATGAGAAGCCCATATCAGAGTCCCTTGTGATTCTTGAGTACATTGATGAGACATGGAAAGACAACCCCATCTTGCCTGCTGAACCTTACCAAAGAGCGTTGACTCGTTTCTGGTCTAAGTTCATAGATGACAAGTGCTTGGCTGCTGCATTCAAAGCTGCTTTCACCCTTGATGAGAAAGAGCGTGAGAAGGGTGTTGAAGAATCATCTGAGGCTCTGCAGTTTCTTGAGGATGAGCTCAAGGACAAGTTCTTTGCTGGTGAGAAATTTGGCTTGGTGGATATTACTGCTGTTTTCATAGCCTTTTGGATCCCTGTTGTTCAAGAAGTATCAGGGCTGCAATTGTTCACCAATGAGAAATTTCCCAAGCTCTACAGATGGAGCCAAGAATTTATCAACGACCCTGTTGTTAAGGAATCCCTGCCTCCCAGAGAACTACTCTTTGCCTTCTTCAAAGCTCGCTATGAAAGTCTTGTTGCTTCAAAGTAG 1323 0.4263 MAASQEEVKLFGVVGSPFVCRAQIALQLKGVEYKFVEEKLNNMSDLLLKYNPVYKKVPVFVHNDKPISESLVIVEYIDETWKHNSILPTEPYQRALARFWSKFIDDKCVAAAWKAAFTVDEKEREKAVEELFEALKFLENELKNKFFGGNEFGLVDIAAVFIPIVQEVAGLQLFTAEKFPKLYKWSQDFHSHPVVKENMPPKDQLFAQSLNKINTSMATYQEEVKLLGIVGSPFVCRVQIALNLKGIEYKYLEEKFDNKSDVLLKYNPVYKKVPVLVHNEKPISESLVILEYIDETWKDNPILPAEPYQRALTRFWSKFIDDKCLAAAFKAAFTLDEKEREKGVEESSEALQFLEDELKDKFFAGEKFGLVDITAVFIAFWIPVVQEVSGLQLFTNEKFPKLYRWSQEFINDPVVKESLPPRELLFAFFKARYESLVASK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi390g00002 440 FunFam Tau class glutathione S-transferase 87 219 - -
Gabi390g00002 440 CDD GST_C_Tau 91 207 IPR045074 GO:0004364|GO:0006749
Gabi390g00002 440 CDD GST_C_Tau 307 432 IPR045074 GO:0004364|GO:0006749
Gabi390g00002 440 Coils Coil 121 141 - -
Gabi390g00002 440 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 306 433 IPR010987 -
Gabi390g00002 440 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 226 423 IPR045073 -
Gabi390g00002 440 SFLD Main (cytGST) 5 218 - -
Gabi390g00002 440 SFLD Main (cytGST) 221 438 - -
Gabi390g00002 440 CDD GST_N_Tau 8 81 - -
Gabi390g00002 440 FunFam Tau class glutathione S-transferase 303 439 - -
Gabi390g00002 440 FunFam Tau class glutathione S-transferase 217 305 - -
Gabi390g00002 440 FunFam Glutathione S-transferase GSTU6 3 88 - -
Gabi390g00002 440 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 209 IPR010987 -
Gabi390g00002 440 SFLD Main.3: Omega- and Tau-like 5 218 IPR045073 -
Gabi390g00002 440 SFLD Main.3: Omega- and Tau-like 221 438 IPR045073 -
Gabi390g00002 440 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Gabi390g00002 440 SUPERFAMILY GST C-terminal domain-like 79 207 IPR036282 -
Gabi390g00002 440 Gene3D - 306 440 - -
Gabi390g00002 440 Gene3D - 90 218 - -
Gabi390g00002 440 SUPERFAMILY Thioredoxin-like 224 324 IPR036249 -
Gabi390g00002 440 CDD GST_N_Tau 224 297 - -
Gabi390g00002 440 Pfam Glutathione S-transferase, N-terminal domain 223 295 IPR004045 -
Gabi390g00002 440 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Gabi390g00002 440 Gene3D Glutaredoxin 1 89 - -
Gabi390g00002 440 Gene3D Glutaredoxin 219 305 - -
Gabi390g00002 440 Pfam Glutathione S-transferase, C-terminal domain 334 413 IPR004046 -
Gabi390g00002 440 Pfam Glutathione S-transferase, C-terminal domain 115 193 IPR004046 -
Gabi390g00002 440 SUPERFAMILY GST C-terminal domain-like 295 434 IPR036282 -
Gabi390g00002 440 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Gabi390g00002 440 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 222 301 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi390g00002 Gabi-Chr390 54095 73188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi390g00002 221 439 Glutathione S-transferase Gene Family AT3G09270 52.703 1.04e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi390g00002 K00799 - egt:105969932 447.203