Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi390g00001 ATGGCTACATATCAGGAAGATGTGAAGCTTTTGGGAATAGTGGGAAGCCCATTTGTGTGCAGAGTGCAGATTGCGCTTAATTTGAAGGGAATTGAATACAAATATCTGGAAGAAAAGTTTGATAACAAGAGTGATCTGCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTATTTGTTCATAATGAGAAGCCTATATCAGAATCCCTCGTGATTATTGAGTACATTGATGAGACATGGAAAGACCACCCCATCTTGCCTGCTGAGCCTTACCAGAAAGCCTTGGCTCGTTTCTGGTCCAAGTTCATAGATGACAAGTGTGTGGTTGCTGCATCGAAAGCTGTTTTTACCATTGATGAGAAACAGCGCGAGAATTGTGTTGAAGAGTCATTTGAGAATCTGCAATTTCTTGAAAATGAGCTCAAAAACAAGTTCTTTGGAGGAGATGAGTTTGGCTTTGTGGATATTGCTGCTGTCTTCGTAGCGTTTTGGATACCTATATTACAAGAAGTTGGGGGGCTGCAACTGTTCACCAGTGAGAAATTTCCCAAACTCTACAATTGGAGCCAAGAATTTCTCAACCATCCCGTTGTCAAAGAAACTCTGCCTCCTAGAGACCCACTTTTTGCCTATTTCAAAGCTCGCTATGAAAGTCTTGTGAATAGGAGTGCGGCAATGGCTACATATCAGGAAGAGGTGAAGCTTTTGGGATTTGTGGGAAGCCCATTTGTGTGTAGAGTGCAGATTGCTCTTAATTTGAAGGGAATTGAATACAAATATCTGGAACAAAAGTTGGACAACAAGAGTGATCTGCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCTGTATTTGTTCATAATGAGAAGCCTATATCAGAATCCCTCGTGATTATTGAGTACATTGATGAGACATGGAAAGACCACCCCATCTTGCCTGCTGAGCCTTACCAGAAAGCCTTGGCTCGTTTCTGGTCCAAGTTCATAGATGACAAGTGCGTGGCTGCTGCATGGAAATCTGTTTATACCATTGATGAGAAAGAGCGAGAGAAGTATGTTGAAGAGTCATTTGAGGCTTTGCAAATTCTTGAGAATGAGCTTAAAAACAAGTTCTTTGGAGGAGAAGAGTTTGGCTTTGTGGATATTGCTGCTGTTTTCATAGCCTTTTGGATACCTTTATTTCAAGAAGTTGGGGGGCTGCAACTGTTCACCAGTGAGAAATTTCCCAAACTCTACAAATGGAGCCAAGAATTTCTCAACCATCCAGTTGTCAAAGAAACTCTGCCTCCTAGAGACCCACTTTTTGCCAATTTGAAAGCTCACTATGAAAGTCTTGTTGCTTCAAAATAG 1353 0.4146 MATYQEDVKLLGIVGSPFVCRVQIALNLKGIEYKYLEEKFDNKSDLLLKYNPVYKKVPVFVHNEKPISESLVIIEYIDETWKDHPILPAEPYQKALARFWSKFIDDKCVVAASKAVFTIDEKQRENCVEESFENLQFLENELKNKFFGGDEFGFVDIAAVFVAFWIPILQEVGGLQLFTSEKFPKLYNWSQEFLNHPVVKETLPPRDPLFAYFKARYESLVNRSAAMATYQEEVKLLGFVGSPFVCRVQIALNLKGIEYKYLEQKLDNKSDLLLKYNPVYKKVPVFVHNEKPISESLVIIEYIDETWKDHPILPAEPYQKALARFWSKFIDDKCVAAAWKSVYTIDEKEREKYVEESFEALQILENELKNKFFGGEEFGFVDIAAVFIAFWIPLFQEVGGLQLFTSEKFPKLYKWSQEFLNHPVVKETLPPRDPLFANLKAHYESLVASK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi390g00001 450 Pfam Glutathione S-transferase, C-terminal domain 341 423 IPR004046 -
Gabi390g00001 450 Pfam Glutathione S-transferase, C-terminal domain 113 197 IPR004046 -
Gabi390g00001 450 FunFam Tau class glutathione S-transferase 87 223 - -
Gabi390g00001 450 SFLD Main.3: Omega- and Tau-like 5 224 IPR045073 -
Gabi390g00001 450 SFLD Main.3: Omega- and Tau-like 231 448 IPR045073 -
Gabi390g00001 450 Gene3D - 90 224 - -
Gabi390g00001 450 Gene3D - 316 450 - -
Gabi390g00001 450 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Gabi390g00001 450 CDD GST_N_Tau 8 81 - -
Gabi390g00001 450 FunFam Glutathione S-transferase GSTU6 3 87 - -
Gabi390g00001 450 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 316 441 IPR010987 -
Gabi390g00001 450 FunFam Tau class glutathione S-transferase 227 315 - -
Gabi390g00001 450 SUPERFAMILY Thioredoxin-like 234 334 IPR036249 -
Gabi390g00001 450 SUPERFAMILY GST C-terminal domain-like 305 444 IPR036282 -
Gabi390g00001 450 SFLD Main (cytGST) 231 448 - -
Gabi390g00001 450 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Gabi390g00001 450 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Gabi390g00001 450 Gene3D Glutaredoxin 1 89 - -
Gabi390g00001 450 Gene3D Glutaredoxin 227 315 - -
Gabi390g00001 450 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Gabi390g00001 450 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Gabi390g00001 450 Pfam Glutathione S-transferase, N-terminal domain 233 305 IPR004045 -
Gabi390g00001 450 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Gabi390g00001 450 FunFam Tau class glutathione S-transferase 313 449 - -
Gabi390g00001 450 SFLD Glutathione Transferase (cytosolic) 5 224 IPR040079 -
Gabi390g00001 450 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Gabi390g00001 450 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 232 311 IPR004045 -
Gabi390g00001 450 CDD GST_C_Tau 317 441 IPR045074 GO:0004364|GO:0006749
Gabi390g00001 450 CDD GST_N_Tau 234 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi390g00001 Gabi-Chr390 24315 31940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi390g00001 231 449 Glutathione S-transferase Gene Family AT3G09270 52.252 5.94e-77 238