Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3898g00034 ATGGCATCGACGGAATCCGATCTCGATTATGACTTCCTGAATCTCGATTATGATTTTCGGTATCAGAGTCTCCCCGGAACCGATGCATTCATGGAAAGCGTTTGCTCTGCCCCTTTCCAAAATCTGTTACCGGACCCGGCGACTTTATTTTCAAGTTGTGGTGGACTAACAGATACCCTTTGTTCCCAAGACGTCACTCCGCATTCCACCGTCACTGCTACTATTGATTCTCAGTCATCGATTTGCGACACCGTTGGCAGCCCTGTGTCAGCTAATAAACCAAACGGCAGAGAGAATCATACCAAAGAAGCTACAAGTGGTTCCTCTGAGCCATCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAGAGCATAAATCCAGTTGATATAAAGCGCCTTAGAAGGAAGGAATCTAATCGGAAGTCTGCAACGAGGTCAAGAAGAAGAAAACAAGAGCATTTGGCTGAACTTGAGTTGCAGGTTGAAAAACTGAAAGTGGAAAAAGCAAACCTATGCAAGCAGTTTACTTATGCTAGTCAACAATTTCATGAGGCTGATACGAATAACCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTGGCTCGGAGCTCTTTCACCACGTTAAACAACCAGCTTCTTCAGACTCAGTGTCAATTGAACACACCAGTGACACCACCAGAACTCAACACGACTGGTCTGCGCCGCATGGCACATGTCTCGCCAACCATCACTGTCCATGGAAATGATGCCTCATACGGTGGTGTCCCAGTTGGACAGAATTCAGCTATTGGGCTTGGAAACTTGGATATGCCTCACAACGACGTCAATAATGGAGTCCTAAATGATGCTATGAGCTCTATGTATATATGGCACCAGTAA 909 0.4554 MASTESDLDYDFLNLDYDFRYQSLPGTDAFMESVCSAPFQNLLPDPATLFSSCGGLTDTLCSQDVTPHSTVTATIDSQSSICDTVGSPVSANKPNGRENHTKEATSGSSEPSDEDDEAGPCEQSINPVDIKRLRRKESNRKSATRSRRRKQEHLAELELQVEKLKVEKANLCKQFTYASQQFHEADTNNRVLKSDVEALRAKVKLAEDMVARSSFTTLNNQLLQTQCQLNTPVTPPELNTTGLRRMAHVSPTITVHGNDASYGGVPVGQNSAIGLGNLDMPHNDVNNGVLNDAMSSMYIWHQ 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3898g00034 302 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 134 149 IPR004827 GO:0003700|GO:0006355
Gabi3898g00034 302 Coils Coil 140 174 - -
Gabi3898g00034 302 SMART brlzneu 127 191 IPR004827 GO:0003700|GO:0006355
Gabi3898g00034 302 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 129 192 IPR004827 GO:0003700|GO:0006355
Gabi3898g00034 302 Gene3D - 130 186 - -
Gabi3898g00034 302 MobiDBLite consensus disorder prediction 85 151 - -
Gabi3898g00034 302 Pfam bZIP transcription factor 130 174 IPR004827 GO:0003700|GO:0006355
Gabi3898g00034 302 Coils Coil 189 209 - -
Gabi3898g00034 302 SUPERFAMILY Leucine zipper domain 131 182 IPR046347 GO:0003700|GO:0006355
Gabi3898g00034 302 CDD bZIP_plant_GBF1 132 183 IPR045314 GO:0003700|GO:0006355
Gabi3898g00034 302 PANTHER BASIC LEUCINE ZIPPER 63 52 287 - -
Gabi3898g00034 302 FunFam BZIP transcription factor 129 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3898g00034 Gabi-Chr3898 277916 282196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3898g00034 76 278 bZIP Transcription Factor Family AT5G24800 51.429 3.65e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3898g00034 bZIP_1 5.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3898g00034 K25784 - gmx:780555 368.237