Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3898g00030 ATGGATCCACCAAAGAAACCTAACAAGATCAGGGACATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGGATAGCCAACTCTTCAAAAACAAGCAGAAGTAACAACAACAGCAACAGCAGTAGAAGCATAAACTTTCTGAAAAGAACACTTTCTATGTCTGAACGTGAGGGAGGAATATCAAGCAATGTTGTTCCCAAAGGCTATCTAGCTGTTTGTGTTGGGGAAAACCTTAGCAGGTTCGTTATACCAACAGAGTATTTGGGTCATCAGGCCTTTCACTTATTACTCAGAGAAGCTGAAGAAGAATTTGGCTTTGAACAAACCGGTGTTCTGAGGATTCCATGTGAAGTGTCGGTGTTTGAGAGTATCTTGAAGATAGTGGAAGGAAAGGACAAGTTCTCTATTCAGAAATGTAGATTTAGCATTGAAAAGATGATCGGATACTGCTCCTCAAACCAGCTTGATTATTCTCATTATCCTCAAAGTCCAATGTGCAAATAG 507 0.3964 MDPPKKPNKIRDIVRLQQILKKWRRIANSSKTSRSNNNSNSSRSINFLKRTLSMSEREGGISSNVVPKGYLAVCVGENLSRFVIPTEYLGHQAFHLLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVEGKDKFSIQKCRFSIEKMIGYCSSNQLDYSHYPQSPMCK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3898g00030 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 40 125 IPR003676 GO:0009733
Gabi3898g00030 168 Pfam Auxin responsive protein 22 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3898g00030 Gabi-Chr3898 219074 219580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3898g00030 5 168 Calmodulin-binding Proteins AT4G31320 50.521 3.72e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3898g00030 K14488 - gmx:100527662 269.24