Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3895g00010 ATGCTATTCACTTTGTTTCCCTCTTACGGTTTGAAGATCACACTTGTGGCGGTGTGCTTCTCGCTCCTCATTGTTAATCGCTACAGAGAGTTATACAATTCTCAGAAAGTTTTCAAGCAATGGGAGCTTGTCCTAGATCCAACCATCAACCCTGTCCTCGGTTTCTCTCGATGCCCTCGTTGTGTTTCCCTTCTCAACCCTGATTGCATGAGAAAGAGGTGGCAACAAGCAATTTCAAACCTCAAAATTTTCTTGATGAAGACTTATAACCAGAATGGACTTCAGGGTGATAGGGAATGGCCTGCTGAAGTTAATTATCTTGGGGAACTCGGTCTTCTAAATCTAGTTAAATTGATTGGTTATTGCATTGAAGATGATAAAAGGCTAATAGTATATGAGTTCATTCTTCGTGGAAGCTTGGAGAATCATCATTTTAAGATATTCATGTCGTGTGCAGCATTGAATAATGTGAAAGAGTGTTCACTTAGGCCAATTTGA 498 0.4016 MLFTLFPSYGLKITLVAVCFSLLIVNRYRELYNSQKVFKQWELVLDPTINPVLGFSRCPRCVSLLNPDCMRKRWQQAISNLKIFLMKTYNQNGLQGDREWPAEVNYLGELGLLNLVKLIGYCIEDDKRLIVYEFILRGSLENHHFKIFMSCAALNNVKECSLRPI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3895g00010 165 SUPERFAMILY Protein kinase-like (PK-like) 82 148 IPR011009 -
Gabi3895g00010 165 PANTHER OS01G0588500 PROTEIN-RELATED 83 149 - -
Gabi3895g00010 165 Gene3D Phosphorylase Kinase; domain 1 69 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3895g00010 Gabi-Chr3895 210298 212491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3895g00010 83 143 Glycoside Hydrolase AT3G07070 50.820 9.68e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi3895g00010 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3895g00010 - - apan:127242367 78.9517