Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3893g00002 ATGAAGAAGATCCATGTAATACTCAGAAAGTGCAAGAGCTTGTCAAGGCAGCTAGGAAGATCTTCATCATATAGTAGCCTCAGGTCCAAATCTGTTAAGGAAGACTTATGGGCAGGACAAGGCATACAAGAAGATGAACATTGTGAAACTATATTTGTAGGCAGCACAAGGAAACGGTATGTGATTAGTTCCAAATATCTGAATCATCCTCTTCTGAATGCTCTAATCAACAAGTCAAAGCAAAAGGGCAGTGATGAAAATGTTTTGGTGGTCAACTGTGAGGTGGTTCTCTTTGATCATCTATTGTGGATGCTAGAAAATGCAGATCCTAAGTTTAGTTCTGAGTCTTTGGAGGAATTGGCTGAACTATATGTGTTTTAA 381 0.3885 MKKIHVILRKCKSLSRQLGRSSSYSSLRSKSVKEDLWAGQGIQEDEHCETIFVGSTRKRYVISSKYLNHPLLNALINKSKQKGSDENVLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3893g00002 126 PANTHER EXPRESSED PROTEIN 9 125 - -
Gabi3893g00002 126 Pfam Auxin responsive protein 28 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3893g00002 Gabi-Chr3893 52347 52805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3893g00002 50 107 Calmodulin-binding Proteins AT5G20810 35.000 1.24e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3893g00002 - - gmx:100527910 191.43