Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00077 ATGCCGAATCCGGAGGCTCAACCTCACCAGCACCGGTCCAGGACTCGACCGTCCACGTCAGCGGCGGTTTCGGCTCGGACGGCGGTGCGGGATAGGGTCCCGCTGAGGCAGTTGCTTAGGGTGGCGTCGGTGGCCAGCGGGATTCAGTTTGGTTGGGCCTTGCAGCTGTCTCTGCTCACGCCGTATGTGCAGCAGCTTGGGATTCCTCATCAATGGGCCAGCATCATCTGGCTCTGCGGCCCAGTCTCTGGCCTCTTCGTTCAGCCCTTGGTGGGCCTCATGAGTGACCGGTGTACCAGCCGGTTCGGTCGCCGGAAACCGTTCATCTTGGTCGGGGCTGCATCGATCGTCGTCGCCGTTATCATAATCGGTTACGCCGCTGACATCGGATGGTGGTTTGGCGACACAGAGAGTAACCGGCCTTGGGCCATAACCTTCTTCGTTATCGGATTTTGGATTCTCGATGTGGCTAACAACGTCACTCAAGGTCCTTGTAGAGCTTTGCTCGCTGATCTCACTAGCAAGGATGCTAGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTGTATGGCTATTGGTAACATTCTTGGCTATGCAACTGGATCATACAGCGGTTGGTACAAGATTTTTACTTTCACGCTTAACCCTGCGTGCACTATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGCGGTAACCACATATATCAGCATCACGGCAGCTCATGAAGTGCCTCTAAATTCAAGTGGGGCAGCCCATGCTGAAGAAGGGGCAGGGGAGTCAGGTAGTGCAGAAGAAGCTTTCATGTGGGAACTATTTGGGACATTCAGATATTTCTCAACTCCTATTTGGATAATACTGTCTGTTACTGCTCTTACATGGATTGGGTGGTTCCCATTTATTCTCTTTGATACTGATTGGATGGGTCGAGAGATTTATGGCGGTGATCCAAATGTAGGCCTTACTTATGATGCTGGAGTTAGAATGGGAGCTCTTGGTTTATTGCTTAATTCAGTAGTTCTTGGAATAACATCATTGCTCATGGAGCGGCTATGCAGGAAGCGAGGGGCTGGTTTTATATGGGGAATTTCAAATATTCTAATGGCTTTTTGCTTTCTTGCAATACTAGTAGTAACCTATGTGGCAAATAACATTGGCTATGTAGGCAAAGACCCACCACCAACTGGCATTGTGATAGCTGCGTTGGTAATCTTCACCATTCTTGGATTTCCATTGGCAATCACTTACAGTGTTCCATATGCTTTAATTTCCACGCACATTGAGCCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTTAATCTGGCAATAGTGATCCCGCAGAGCCCCGGATTGGGAGCTGTGAATGGTGAACACACTATAAATGAAGGAATGAATGGAAGTGCCGGAAGTGAGGCTTGA 1446 0.4917 MPNPEAQPHQHRSRTRPSTSAAVSARTAVRDRVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGLMSDRCTSRFGRRKPFILVGAASIVVAVIIIGYAADIGWWFGDTESNRPWAITFFVIGFWILDVANNVTQGPCRALLADLTSKDARRTRVANAYFSLCMAIGNILGYATGSYSGWYKIFTFTLNPACTISCANLKSAFFLDIAFIAVTTYISITAAHEVPLNSSGAAHAEEGAGESGSAEEAFMWELFGTFRYFSTPIWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNVGLTYDAGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFIWGISNILMAFCFLAILVVTYVANNIGYVGKDPPPTGIVIAALVIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVIPQSPGLGAVNGEHTINEGMNGSAGSEA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00077 481 SUPERFAMILY MFS general substrate transporter 36 454 IPR036259 -
Gabi3887g00077 481 PANTHER SUGAR TRANSPORTER 32 457 - -
Gabi3887g00077 481 Pfam MFS/sugar transport protein 53 435 - -
Gabi3887g00077 481 Gene3D MFS general substrate transporter like domains 34 463 IPR036259 -
Gabi3887g00077 481 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3887g00077 481 CDD MFS_SLC45_SUC 38 463 - -
Gabi3887g00077 481 NCBIfam sucrose/proton symporter 33 456 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00077 Gabi-Chr3887 608258 620053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00077 7 456 Sucrose Transporter Gene Family AT1G09960 69.365 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00077 K15378 - gmx:100820483 754.207