Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00076 ATGCCGAATCCGGAGGCTCAACCTCACCAGCACCGGTCCAGGACTCGACCGTCCACGTCAGCGGCGGTTTCGGCTCGGACGGCGGTGCGGGATAGGGTCCCGCTGAGGCAGTTGCTTAGGGTGGCGTCGGTGGCCAGCGGGATTCAGTTTGGTTGGGCCTTGCAGCTGTCTCTGCTCACGCCGTATGTGCAGCAGCTTGGGATTCCTCATCAATGGGCCAGCATCATCTGGCTCTGCGGCCCAGTCTCTGGCCTCTTCGTTCAGCCCTTGGTGGGCCTCATGAGTGACCGGTGTACCAGCCGGTTCGGTCGCCGGAAACCGTTCATCTTGGTCGGGGCTGCATCGATCGTCGTCGCCGTTATCATAATCGGTTACGCCGCTGACATCGGATGGTGGTTTGGCGACACAGAGAGTAACCGGCCTTGGGCCATAACCTTCTTCGTTATCGGATTTTGGATTCTCGATGTGGCTAACAACGTCACTCAAGGTCCTTGTAGAGCTTTGCTCGCTGATCTCACTAGCAAGGATGCTAGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTGTATGGCTATTGGTAACATTCTTGGCTATGCAACTGGATCATACAGCGGTTGGTACAAGATTTTTACTTTCACGCTTAACCCTGCGTGCACTATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTTGACATTGCTTTCATTGCGGTAACCACATATATCAGCATCACGGCAGCTCATGAAGTGCCTCTAAATTCAAGTGGGGCAGCCCATGCTGAAGAAGGGGCAGGGGAGTCAGGTAGTGCAGAAGAAGCTTTCATGTGGGAACTATTTGGGACATTCAGATATTTCTCAACTCCTATTTGGATAATACTGTCTGTTACTGCTCTTACATGGATTGGGTGGTTCCCATTTATTCTCTTTGATACTGATTGGATGGGTCGAGAGATTTATGGCGGTGATCCAAATGTAGGCCTTACTTATGATGCTGGAGTTAGAATGGGAGCTCTTGGTTTATTGCTTAATTCAGTAGTTCTTGGAATAACATCATTGCTCATGGAGCGGCTATGCAGGAAGCGAGGGGCTGGTTTTATATGGGGAATTTCAAATATTCTAATGGCTTTTTGCTTTCTTGCAATACTAGTAGTAACCTATGTGGCAAATAACATTGGCTATGTAGGCAAAGACCCACCACCAACTGGCATTGTGATAGCTGCGTTGGTAATCTTCACCATTCTTGGATTTCCATTGGCAATCACTTACAGTGTTCCATATGCTTTAATTTCCACGCACATTGAGCCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTTAATCTGGCAATAGTGATCCCGCAGATAGTGGTGTCCCTGGGAAGTGGACCATGGGATCAACTATTTGGTGGAGGAAATTCCCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTTGTCAGTGGACTCATAGCTGTCTTGGCTATTCCCCGATCTGGTGCTCAAAAGGCCCGAATCCATGTATGA 1527 0.4951 MPNPEAQPHQHRSRTRPSTSAAVSARTAVRDRVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGLMSDRCTSRFGRRKPFILVGAASIVVAVIIIGYAADIGWWFGDTESNRPWAITFFVIGFWILDVANNVTQGPCRALLADLTSKDARRTRVANAYFSLCMAIGNILGYATGSYSGWYKIFTFTLNPACTISCANLKSAFFLDIAFIAVTTYISITAAHEVPLNSSGAAHAEEGAGESGSAEEAFMWELFGTFRYFSTPIWIILSVTALTWIGWFPFILFDTDWMGREIYGGDPNVGLTYDAGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFIWGISNILMAFCFLAILVVTYVANNIGYVGKDPPPTGIVIAALVIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNSPAFAVAAVAALVSGLIAVLAIPRSGAQKARIHV 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00076 508 PANTHER SUGAR TRANSPORTER 32 494 - -
Gabi3887g00076 508 CDD MFS_SLC45_SUC 38 475 - -
Gabi3887g00076 508 NCBIfam sucrose/proton symporter 33 499 IPR005989 GO:0005886|GO:0008515|GO:0015770
Gabi3887g00076 508 SUPERFAMILY MFS general substrate transporter 36 499 IPR036259 -
Gabi3887g00076 508 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3887g00076 508 Gene3D MFS general substrate transporter like domains 34 495 IPR036259 -
Gabi3887g00076 508 FunFam Sucrose transport protein 32 496 - -
Gabi3887g00076 508 Pfam MFS/sugar transport protein 53 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00076 Gabi-Chr3887 608258 622304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00076 7 503 Sucrose Transporter Gene Family AT1G09960 68.849 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00076 K15378 - gmx:100820483 833.558