Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00067 CCCGGTGGCGGCGGCGAGGTAGCTCATCAGAATCTGCTGAATTCCGGCGAAAATGGGTCTCCGTTAACATCCGGTGAGAGTAGGAAGAGATCCTCGCCGGCCAGAAAGGGTGGGAGAGGTTGCTACCAAAGAAGGAAGGGTGCAGAGACATGGATCACATTTTCCTGCACCACAGATGATAATCATGCATGGAGGAAGTACGGACAAAAGGAAATCCAGAATTCAAAATTCCCTAGGAGTTACTTCAGGTGCAGTCACATTAAATATGATCAAGGTTGCAAAGAAACCAAACAGGTGCAGCTGACACAACAGAATCCTGATATGTACCAAACTATGTACATTGGCATTCACACATTTGGTCACAGATTCTAG 372 0.4704 PGGGGEVAHQNLLNSGENGSPLTSGESRKRSSPARKGGRGCYQRRKGAETWITFSCTTDDNHAWRKYGQKEIQNSKFPRSYFRCSHIKYDQGCKETKQVQLTQQNPDMYQTMYIGIHTFGHRF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00067 123 MobiDBLite consensus disorder prediction 1 42 - -
Gabi3887g00067 123 ProSiteProfiles WRKY domain profile. 59 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00067 123 MobiDBLite consensus disorder prediction 11 28 - -
Gabi3887g00067 123 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 27 118 IPR044810 GO:0003700
Gabi3887g00067 123 Pfam WRKY DNA -binding domain 59 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00067 123 Gene3D WRKY domain 50 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00067 123 SMART WRKY_cls 58 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00067 123 SUPERFAMILY WRKY DNA-binding domain 56 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00067 Gabi-Chr3887 509394 518326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00067 24 118 WRKY Transcription Factor Family AT3G56400 60.000 1.39e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3887g00067 WRKY 4.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00067 - - gmx:100796071 160.999