Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00066 ATGAATATCCTTTGCCCTGAAAGTGTTTCAGCCAAGTGGAAAAAAGTGATAATCAGAAAGCTTCTTCAGGGTCAGAAGGCTGCAACACAGCTCAAGGTTCTGCTTGAAAAGCCATTTGAGGATGATGAGTCTCTCTCCTCTAAAGAACTCGTGGCCAGTGTACTGAGATCTTTCACCGAGGCTCTTTCTGTCATAACTTCTTCCTCAGAACCCGGTGGTGATGGTGAGGTAGCTCATCAGAATCTGCTGAATTCCGGCGAGGATGGGTCTCCATTAGCGTCTGGAGATTCCGGTGAGAGTAGGAAGAGATCCTCGCCGGCCAGAAAGGGTGGGAGAGGTTGCTACCAAAGAAGGAAGGGTGCACAGACAAGAACCACACTCTCCCACACCACCAATGATAATTATGCATGGAGGAAGTACGGACAAAAGGGAATCCAGAATTCCAAATTCCCCAGGAGTTACTTCAGGTGCAGTCACAAGCTTGATCAAGGTTGCAAAGCAACCAAACAGGTGCAGCTGACACAAGAGAATCCTGATATGTACCAAATTATGTACATTGGCATTCACACATGTAAAGCCACCCCCAATGCTACACATTTGGTAACATATTCTAGTACTGGGGAATCATTTATTCTGAATTCTGATCCTGACTCAAAGATACCAAATGAACAGGATCACCATATTAGCTCCCCAAGCCTAACTATAAAACAAGTATATCTCAAAGAAGACAATTCGAGTGATGTTACAGATCACATGTTGGATCGTAGCCTGTTGTCGGATTTGAAGGATTTTGAAGCCTACAAGCCTGTCATTATGCCTTTAAAAGTGGAATCTGTTAATACAGATTCATGTACAGTTTCTCAACATTTGGACATAGATCTCCAGGTGGAGTCTGTTCATTTTGGCACTGACTTCCACTTTGATGAGAGTCAGTTGCTTTCCTGCTTTGATTAG 954 0.4392 MNILCPESVSAKWKKVIIRKLLQGQKAATQLKVLLEKPFEDDESLSSKELVASVLRSFTEALSVITSSSEPGGDGEVAHQNLLNSGEDGSPLASGDSGESRKRSSPARKGGRGCYQRRKGAQTRTTLSHTTNDNYAWRKYGQKGIQNSKFPRSYFRCSHKLDQGCKATKQVQLTQENPDMYQIMYIGIHTCKATPNATHLVTYSSTGESFILNSDPDSKIPNEQDHHISSPSLTIKQVYLKEDNSSDVTDHMLDRSLLSDLKDFEAYKPVIMPLKVESVNTDSCTVSQHLDIDLQVESVHFGTDFHFDESQLLSCFD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00066 317 Pfam WRKY DNA -binding domain 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00066 317 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 213 IPR044810 GO:0003700
Gabi3887g00066 317 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00066 317 MobiDBLite consensus disorder prediction 66 130 - -
Gabi3887g00066 317 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00066 317 ProSiteProfiles WRKY domain profile. 126 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00066 317 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00066 Gabi-Chr3887 501259 503632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00066 14 249 WRKY Transcription Factor Family AT2G40750 36.822 1.21e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3887g00066 WRKY 2.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00066 - - gmx:100796071 345.51