Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00064 ATGAATATCCTTTGCCCTGAAAGTGTTTCAGCCAAGTGGAAAAGAGTGATCATCAGAGAGCTTCTTCAGGGGCAGAAATCTGCTACACAGCTCAAGGTTCTACTTGAGAAACCCTTTGAGGATGATGGGTCTTTCTCCTCTGAAGAACTCGTGACCAACATACTGAGATCTTTCACAGAGGCTCTTTCTATCATAACTTCTTCCTCAGAACCCGGTTGTGGTGGCGAGGTAGCTCATCAGAATCTGCTGAATTCCGGCGAAAATGGGACTCCATTTACGTCTGGAGATTCCGGTGAGAGTAGGAAGAGATCCTCGCCGGCAAGAAAGGTTGGGAGAGGTTGCTACCAAAGAAGGAAGGGTGCACAGACAAGAACCACACTCTCCAACACCACCGATGATAATCATTCATGGAGGAAGTACGGACAAAAGGAAATCCAGAATTCTAAATTCCCTAGGAGTTACTTCAGGTGCAGTAGCAAGTATGATCAAGGTTGTAAAGCAACCAAACAGGTGCAGCTGACACAAGAGAATCCTGATATGTACAAAATTATGTACATTGGCATTCACACATGTAAAGCCACCCCCAAGGCTACACATTTGGTCACAGATTCTAGTACTTGGGAATCTTTTATTCTGAATTCTGATCCTGACTCAAACATACCAAATGAACAGGATCACCATATTAGCTCCCCAAGCCTAACTAAAAAACAAGAATATCCCAAAGAAAACAATTCGAGTGATGTTACGGATCACGAGTTGGATCCTAGCCTGTTGTCCGATTTGAAGGATTCAGAACCCTCCAAGCCTGTCATTATGCCTTTGAAAATGGAATCTGTTAATGCAGATTCATGTATAGTTTTTCAACATTTGGACATAGATTTCGAGGTGGAGTCCGTTCATCTTGCCACTGACTTCCACTTTGATGAGAATCAGTTGCTTTGA 942 0.4331 MNILCPESVSAKWKRVIIRELLQGQKSATQLKVLLEKPFEDDGSFSSEELVTNILRSFTEALSIITSSSEPGCGGEVAHQNLLNSGENGTPFTSGDSGESRKRSSPARKVGRGCYQRRKGAQTRTTLSNTTDDNHSWRKYGQKEIQNSKFPRSYFRCSSKYDQGCKATKQVQLTQENPDMYKIMYIGIHTCKATPKATHLVTDSSTWESFILNSDPDSNIPNEQDHHISSPSLTKKQEYPKENNSSDVTDHELDPSLLSDLKDSEPSKPVIMPLKMESVNADSCIVFQHLDIDFEVESVHLATDFHFDENQLL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00064 313 ProSiteProfiles WRKY domain profile. 126 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00064 313 MobiDBLite consensus disorder prediction 240 261 - -
Gabi3887g00064 313 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 226 IPR044810 GO:0003700
Gabi3887g00064 313 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00064 313 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00064 313 MobiDBLite consensus disorder prediction 213 239 - -
Gabi3887g00064 313 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00064 313 MobiDBLite consensus disorder prediction 83 100 - -
Gabi3887g00064 313 Pfam WRKY DNA -binding domain 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00064 313 MobiDBLite consensus disorder prediction 83 137 - -
Gabi3887g00064 313 MobiDBLite consensus disorder prediction 119 135 - -
Gabi3887g00064 313 MobiDBLite consensus disorder prediction 213 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00064 Gabi-Chr3887 473262 476587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00064 14 197 WRKY Transcription Factor Family AT3G56400 46.073 1.51e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3887g00064 WRKY 6.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00064 - - gmx:100796071 348.206