Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00063 ATGAATATCCTTTGTCCTGAAAGTGTCTCAGCCAAGGAGAAAAGAGTGATCATGAAAGAGCTTCTTCAGGGTCAGAAATCTGCTACACAGCTCAAGGTTTTGCTTGAGAAACCCTTTAGGAATGATGGGTCTCTCTCCTCTGAAGAACTCGTGGCCACTGTACTGAGATCTTTCACAGAGGCTCTTTCCATAATAACTTCTTCCTCAGAACCCGGTGGTGATGGTGAGGTAGCTCATCAGAATCTGCTGAATTCCGGCGAAAATGGGTCTCCATTAACGTCTGCAGATTCCGGTGAGAGTAGGAAGAGATCCTCGCCGGCCAGAAAGGTTGGGAGAGGTTGCTACCAAAGAAGGAAGGGTGCACAGACAAGAATCACACTCTCCCACATCACCGATGATAATCATTCATCATGGAGGAAGTACGGACAAAAGGATATCCAGAATTCTAAGTTCCCTAGGAGTTACTTCAGGTGCAGTCGCAGGTACGATCAAGGTTGCAAAGCAACCAAACAGGTGCAGCTGACACAAGAGAATCCTGATATGTACCAAACTATGTACATTGGCATTCACACATGTAAAGCCATTCCCAAGGCTACACATTTGGTCACAGATTCAAGTACTTGGGAATCCTCTCTTCTGAATTCTGATCCTGACTCAAAGATACCAAATGAATAG 675 0.4533 MNILCPESVSAKEKRVIMKELLQGQKSATQLKVLLEKPFRNDGSLSSEELVATVLRSFTEALSIITSSSEPGGDGEVAHQNLLNSGENGSPLTSADSGESRKRSSPARKVGRGCYQRRKGAQTRITLSHITDDNHSSWRKYGQKDIQNSKFPRSYFRCSRRYDQGCKATKQVQLTQENPDMYQTMYIGIHTCKAIPKATHLVTDSSTWESSLLNSDPDSKIPNE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00063 224 ProSiteProfiles WRKY domain profile. 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00063 224 SMART WRKY_cls 131 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00063 224 MobiDBLite consensus disorder prediction 81 100 - -
Gabi3887g00063 224 Pfam WRKY DNA -binding domain 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00063 224 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 205 IPR044810 GO:0003700
Gabi3887g00063 224 MobiDBLite consensus disorder prediction 66 113 - -
Gabi3887g00063 224 Gene3D WRKY domain 115 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3887g00063 224 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00063 Gabi-Chr3887 460969 463145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00063 13 192 WRKY Transcription Factor Family AT3G56400 43.169 9.43e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3887g00063 WRKY 3.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00063 - - gmx:100796071 253.832