Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00049 ATGGACACGAACCAAGGTGTTCTCTTGGCTCTTGACAATGCCAAGACACAAGGCTACCATTACAAGGCAATTGTGATAGCTGGGATGGGATTCTTCACTGATGCATATGATCTCTTTTGCATCACTGCAGTGACCAAACTTATAGGTCGTTTGTACTACTTTGACCCCAATAGTAATAGTCCAGGAAAGCTTCCAACGAATGTAAACAATGCAATAACTGGGGTTGCTTTGTGTGGAACCCTGGTGGGGCAGCTCTTCTTTGGCTGGCTTGGTGACAAGCTTGGTAGAAAAAAGGTTTATGGCATAACTCTTGCCACCATGGTGGGTTGTGCCTTGTTATCAGGGCTTTCCTTTGGCTCCACATCCAAAAGTGTGGTTGCTACTCTATGCTTCTTCAGATTCTGGCTGGGATTTGGCATTGGAGGAGACTACCCTCTCTCAGCTGTTATTATGTCTGAATATGCCAATCAAAAAACCCGAGGAGGTTTTATTGCTGCTGTCTTTGCTATGCAAGGAATGGGAATATTGGTTGCTGGAGCTGTGGCCATGTTGGTGTCAAGACTATTCTTAGCAGCTTACCCAGCTGATGATTTTGAGACTCATCCTGTGATATCTACTCAGCCTCAAGGAGATTTTGTTTGGAGAATTGTGCTCATGTTTGGTGCATTTCCTGCAGCCTTCACTTATTACTGGCGAATGAAAATGCCGGAAACTGCTAGGTACACTGCTTTGGTGGAAAGTGACCACAAGAAGGCTATTGAAGATATGGCCAAAGTTCTTGATAAGGGCATACCTTTGGAAGAATCAAATACCAGGCTTTCTGACACTTTGAGCCCCTCTTATGGATTCTTCTCTTCAGAGTTTCTTGCTAGGCATGGTCTTCACCTTCTAGGAACCACCAGCACCTGGTTCTTGTTGGATATTGCCTTCTATAGTCTTCAACTCACACAAAAGGATATTTACCCAGCCATTGGACTTGTATACAAGGCTTCCAAAATGAATGCCATAGAGGAGGTGTTTCAACTCTCCAGAGCAATGTTTGTGGTGGCCCTGCTTGCAACTGTCCCTGGGTACTGGTGCACTGTGTTCCTCATTGACAAGATTGGAAGACACAGAATCCAGCTTGTTGGATTTCTTCTAATGTCTGTTTTTATGTGGTTTCTGGGACACAGTTATGGAGAATATAGGGGAGTGTCTGAATGTGGCTCACAGGCAAAATATGATTATTGTCACGGAAACAGAAGCATGTTTGCCATATTTTATGGACTTACCCTCTTCTTTGCTAACTTTGGACCCAATAGCACAACATTTATAGTACCAGCAGAGCTGTTTCCTGCTAGGTTCCGTTCAACATGCCATGGTATATCAGCAGCAGCAGGAAAATCAGGAGCTATCATTGGCGCTTTTGTGGTGCAAAGCTATATTGATGATGCAAATAACAAAACAAAAGGAACCAAGAAAGCAATTATGGTACTTTCAGTTGTCAACTTGCTTGGATTCTTTTGCACTTTCTTAGTGCCAGAAACACAAGGTCGTTCATTAGAAGAAATCTCAGGAGAGGATAAAGAACTCCATGGCAATGTTACTGCAGAAAAAGCAAATGAGAAAATAAATGATGCAAAAGAGCGAACACGAAATGCTAGTGTTGATAAATCTCCAGGAGCTTCAAAAGTTTAG 1677 0.4299 MDTNQGVLLALDNAKTQGYHYKAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYFDPNSNSPGKLPTNVNNAITGVALCGTLVGQLFFGWLGDKLGRKKVYGITLATMVGCALLSGLSFGSTSKSVVATLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGGFIAAVFAMQGMGILVAGAVAMLVSRLFLAAYPADDFETHPVISTQPQGDFVWRIVLMFGAFPAAFTYYWRMKMPETARYTALVESDHKKAIEDMAKVLDKGIPLEESNTRLSDTLSPSYGFFSSEFLARHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPAIGLVYKASKMNAIEEVFQLSRAMFVVALLATVPGYWCTVFLIDKIGRHRIQLVGFLLMSVFMWFLGHSYGEYRGVSECGSQAKYDYCHGNRSMFAIFYGLTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKSGAIIGAFVVQSYIDDANNKTKGTKKAIMVLSVVNLLGFFCTFLVPETQGRSLEEISGEDKELHGNVTAEKANEKINDAKERTRNASVDKSPGASKV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00049 558 FunFam Inorganic phosphate transporter 1-6 19 532 - -
Gabi3887g00049 558 SUPERFAMILY MFS general substrate transporter 12 519 IPR036259 -
Gabi3887g00049 558 Gene3D MFS general substrate transporter like domains 19 535 IPR036259 -
Gabi3887g00049 558 Pfam Sugar (and other) transporter 24 518 IPR005828 GO:0016020|GO:0022857|GO:0055085
Gabi3887g00049 558 Coils Coil 530 550 - -
Gabi3887g00049 558 NCBIfam phosphate:H+ symporter 10 520 IPR004738 GO:0005315|GO:0006817|GO:0016020
Gabi3887g00049 558 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 516 - -
Gabi3887g00049 558 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 511 IPR020846 GO:0022857
Gabi3887g00049 558 MobiDBLite consensus disorder prediction 517 558 - -
Gabi3887g00049 558 CDD MFS_PhT 24 509 - -
Gabi3887g00049 558 MobiDBLite consensus disorder prediction 517 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00049 Gabi-Chr3887 380214 382097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00049 2 520 Inorganic Solute Cotransporters AT5G43360 61.553 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00049 K08176 - gmx:100820250 904.049