Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00041 ATGGAAAATTTGGATGCTAATTCAGACCAGTACGCTACCATTTCTCCTAATTTATCATCATCATCATCATCATCTGGAGGTGTTAATAGTAATGATAACAATGGTAACAGTAATAGTAATAGCAGTGTTGGCACTGGTCCCTGGTATGGGATGAGGTTGCCCTCTGTTAGCCCCTTTCGTTCTCCACTTTCCTTTTTGTTGGATTACTCTGGCATTCTACGCTCACCCCATGATTCTGAGGCTGTGATTGTCAACAATGGAGTTCCTGGTTCGGAATTAAGGTCTCAGCTTCAAACTGGGTCGTTTGATGCTGCTGCTGATGCTGGGAACAGTGCAGGGGAAGTTGCAATAAGGATCATTGGAGCTGGAGAGCATGATCAGAATCAGCTTGGAGAAGTGGGGCATGATGATTGTGATGATCTGATGGATGATAGAGGTGGAATGCCTGCATTGGATGATGATGATGATGCTGGGGGTCGTGGTAGAAATGCTGTTGGTGAGAGGGTTCCTTTGGTGTCTTCGTCTTCACCATTGGCTGGTAGTGGACAGGTTGGTGGTGATGCTGCTGGGAATGGTAACAGTAGGGATTCATCATCCTACCAGAGGTATGATATTCAGCAAATTGCCAAGTGGATTGAGCAAATTCTTCCTTTCTCGCTCTTGTTGGTGGTTGTTTTCATCCGACAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATATCAGCTGTGATGTTCAAATCAAATGAAATTGTTAAGAAACAGACAGCTTTAAAGGGAGATAGGAAAGTGTCTATCCTTATTGGCATTGCTTTTGCTTTCATGCTTCACGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGTCATGCTTCCTCCAAAAGCAACACCTTTCTGGCATGCCATATTCATCATCTTGGTTAATGATACATTGGCACGGCAAGCTGCAATGGCTTTCAAGTGTTTCCTGCTTATATATTACAAAAATGGCAAAGGTCATAACTTCCGTCGGCAGGCTCAAATGTTAACTCTGGTTGAGTACACGCTGCTGTTGTATCGTGCTTTGTTGCCAACCCCAGTTTGGTACCGGTTTTTCTTGAACAGGGATTATGGCAGTCTCTTTTCGTCACTGACCACTGGATTGTATCTAACTTTCAAGCTAACATCTGTAGTTGAGAAGGTCCAATGTTTCGTTGCTGCCTTGAAGGCTTTATCAAGAAAGGAAGTTCATTATGGGGTTAATGCCACAATGGAGCAGTGGGATGAACTTTATGTCAATGTGCTTTGTTTGCAGTTTTATTGA 1317 0.4313 MENLDANSDQYATISPNLSSSSSSSGGVNSNDNNGNSNSNSSVGTGPWYGMRLPSVSPFRSPLSFLLDYSGILRSPHDSEAVIVNNGVPGSELRSQLQTGSFDAAADAGNSAGEVAIRIIGAGEHDQNQLGEVGHDDCDDLMDDRGGMPALDDDDDAGGRGRNAVGERVPLVSSSSPLAGSGQVGGDAAGNGNSRDSSSYQRYDIQQIAKWIEQILPFSLLLVVVFIRQHLQGFFVTIWISAVMFKSNEIVKKQTALKGDRKVSILIGIAFAFMLHVMCIYWWYRNDDLLYPLVMLPPKATPFWHAIFIILVNDTLARQAAMAFKCFLLIYYKNGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNRDYGSLFSSLTTGLYLTFKLTSVVEKVQCFVAALKALSRKEVHYGVNATMEQWDELYVNVLCLQFY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00041 438 MobiDBLite consensus disorder prediction 1 42 - -
Gabi3887g00041 438 MobiDBLite consensus disorder prediction 129 162 - -
Gabi3887g00041 438 MobiDBLite consensus disorder prediction 127 198 - -
Gabi3887g00041 438 MobiDBLite consensus disorder prediction 174 198 - -
Gabi3887g00041 438 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 30 426 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00041 Gabi-Chr3887 340066 345540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00041 60 424 C3H Transcription Factor Family AT5G01960 59.893 6.45e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00041 - K22379 qsa:O6P43_020068 532.717