Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00039 ATGCTTCACGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGTCATGCTTCCTCCAAGAGCAACACCTTTCTGGCCTGCAATATTCATCATCTTGGTTAATGATACATTGACGCGGCAAGCTGCAATGGCTTTCCAGTGTTTCCTGCTTATATATTACAAAAATGGCAAAGGTCATACCTTCAGTCAGCAGGCTCAAATGTTAACTCTGGTTGAGTACACACTGCTGTTGTATCATGCCTTGTTGCCAACCCCAGTTTGGTACCGGTTTTTCTTGAACAGGGATTATGGCAGTCTCTTTTCATCACTGACCACTGGATTGTATCTAACTTTCAAGCTGACATCTGTCGTTGAGAAGTAG 378 0.4286 MLHVMCIYWWYRNDDLLYPLVMLPPRATPFWPAIFIILVNDTLTRQAAMAFQCFLLIYYKNGKGHTFSQQAQMLTLVEYTLLLYHALLPTPVWYRFFLNRDYGSLFSSLTTGLYLTFKLTSVVEK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00039 125 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 1 125 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00039 Gabi-Chr3887 333192 336445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00039 3 125 C3H Transcription Factor Family AT5G01960 74.194 1.19e-64 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00039 - K22379 qsa:O6P43_020068 226.868