Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00038 ATGCTTCACGTGATGTGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGTCATGCTTCCTCCAAGAGCAACACCTTTCTGGCCTGCAATATTCATCATCTTGGTTAATGATACATTGACGCGGCAAGCTGCAATGGCTTTCCAGTGTTTCCTGCTTATATATTACAAAAATGGCAAAGGTCATACCTTCAGTCAGCAGGCTCAAATGTTAACTCTGGTTGAGTACACACTGCTGTTGTATCATGCCTTGTTGCCAACCCCAGTTTGGTACCGGTTTTTCTTGAACAGGGATTATGGCAGTCTCTTTTCATCACTGACCACTGGATTGTATCTAACTTTCAAGCTGACATCTGTCGTTGAGAAGGTCCAATGCTTCGTTGCTGCCTTGAAAGCTTTATCAAGAAAGGAAGTTCATTATGGGGTTAATGCCACAATGGAACAGGTGATATTCCAGTTTCACATAAATTTTTGTTATTAA 489 0.4131 MLHVMCIYWWYRNDDLLYPLVMLPPRATPFWPAIFIILVNDTLTRQAAMAFQCFLLIYYKNGKGHTFSQQAQMLTLVEYTLLLYHALLPTPVWYRFFLNRDYGSLFSSLTTGLYLTFKLTSVVEKVQCFVAALKALSRKEVHYGVNATMEQVIFQFHINFCY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00038 162 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 1 153 IPR044235 GO:0061630|GO:1904294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00038 Gabi-Chr3887 333007 336445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00038 3 152 C3H Transcription Factor Family AT5G01960 74.834 1.47e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00038 - K22379 qsa:O6P43_020068 270.781