Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3887g00014 ATGGGAAACACAGAGAGAGAAGCAGAGGCAAAGAGCATGAGAACTGTGAAGGAATGGTTCATGTCTTCACAGGCTTTGCTGAGCATGTTACTTGTGCAAATTTTTGCAACTGGGATGCAGCTACTATCAAGGGTTATATTAGTTCAGGGTACTTTCATCTTTGCACTCATTACATATCGTCATGTTGTTGCTGCCATTTGTGTTGCCCCCTTTGCACTCTACTTTGAAAGAGGCCGCACAAAGAAGTTCAGTTGGAGAGTTTTGTTTTGGATCTTTGTTAACGCATTAGCGGGGATGACTATGGCTCTAGGATTGTTCTATTATGGTCTGCGAGACACTTCAGCTACTTACTCTGTCAACTTTCTCAACTTGGTTCCAATATGCACCTTCTTTACCTCTATCATATGCAGAATGGAGAAACTGGGGCTGGGAACGTGGGCTGGTAAAGCCAAGTGTGTGGGGGCAATTTTGTGTGTTGGGGGTGCTTTAGCTACAAGTCTTTACAAAGGGAAGGAATTTTATCTTGGTCATCATAGTCATCACACTCAGGCTAATGTTGTGGCACACAAAACCCACATGCTTCGTGGCACTTTCTTTTTGGTTGGAAGTTGCTTCTCATACACAGCTTGGTTTATTGTGCAAGTCAAGTTGCTTAAAGTTTTTCCGCTAAGGTATTGGGCAACAATGCTAACATGCATTATGGCAGCATTTCAAGCAGCAATAGTAGGCGTATTCATGGATCACACAAAAGCTGCTTGGAGTTTAGGGTGGAATCTACAACTGATCACTATATTGTACTCGGGAGCACTGGCCTCGGCAGCTACATTTTGCTTAATATCTTGGGCAATTACGATCAAAGGACCTACTTATCCTCCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCCTTGTCAGAAGCTATCATACTTGGTGAACCATTAAAAGTTGGAACGTTGCTGGGCATGGTTTTGATCATAATGGGATTGTACTGCTTCTTGTGGGGCAAGAAGAATGAGAAACAGCGCTTGCCTCAACCAAATGTAGCAGCTGCAGAAGTATCAACAACCATGGCTGATGATGAGCTTGCTGGGGTGCAATCAACAGCCATAGTAGTACCAAGTTCTTCACCTAATAATAGTGTAGTTTTAGAAATTGAAAAGATTGACAGAAACTGA 1176 0.4277 MGNTEREAEAKSMRTVKEWFMSSQALLSMLLVQIFATGMQLLSRVILVQGTFIFALITYRHVVAAICVAPFALYFERGRTKKFSWRVLFWIFVNALAGMTMALGLFYYGLRDTSATYSVNFLNLVPICTFFTSIICRMEKLGLGTWAGKAKCVGAILCVGGALATSLYKGKEFYLGHHSHHTQANVVAHKTHMLRGTFFLVGSCFSYTAWFIVQVKLLKVFPLRYWATMLTCIMAAFQAAIVGVFMDHTKAAWSLGWNLQLITILYSGALASAATFCLISWAITIKGPTYPPMFNPLALIFVALSEAIILGEPLKVGTLLGMVLIIMGLYCFLWGKKNEKQRLPQPNVAAAEVSTTMADDELAGVQSTAIVVPSSSPNNSVVLEIEKIDRN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3887g00014 391 Pfam EamA-like transporter family 26 158 IPR000620 GO:0016020
Gabi3887g00014 391 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Gabi3887g00014 391 PANTHER WAT1-RELATED PROTEIN 26 345 IPR030184 GO:0016020|GO:0022857
Gabi3887g00014 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 159 - -
Gabi3887g00014 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3887g00014 Gabi-Chr3887 171490 175949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3887g00014 27 337 Nodulin-like Gene Family AT1G09380 35.849 1.64e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3887g00014 - - gmx:100792281 565.074