Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3883g00032 ATGATCAATTCACTGTGTGGAAGCTCAGTGTCTCTCACTTCTTCAAATGACTCAGTTTTGAAGTCAAAGAAAAATGCAACTCAATCCTCTGCTGATTTAGAACAGGCTAGTCTTACTCCACCAAGCTTAAACCTTCCATCACTCAAATTTGATTTGGATGGAGATGTTGAAGTTCAATCACCAGATAGTTCAATGTGGGAGTCCTTTTTCTCTGATCAGTTAGATGCTGATTTCATGATATCTTCTCCAGTGAGGAATGTTCCTTCCCCACAAGCTTCAACTTACAATTGCAACTATAACTATGCTCAGGGTGCTCAATGTCAGAGTCTTTCAGGGTGTTCACCACCTCGTTTTTCATCCCAAAGTGGTGCCCTTAACAGCAGCCACAAAGGGAAAGGACTTAGTCCTCTCCATAGGGTATTTAACTCACCAAACAGTCAATATATGCAGCATATTGAAAACCTTTCACTGCCAGCAATAGAAGAGTTTTTGGAAGATTATCAAGGAGATGGACTTGGTGGTGGATATCCATCAACTAAGGTGTCTTCTGATATTGGAAGTTCATCTGAATGCTTTGACATGCCAACTTCAATTCCATCCATCTTGGATAGCTTGACAATGCCCAATTCCTCAAGGTACTGTGGATCAGTTAGTGAAGAATCCTCAGTGCACGGTGGTTCTTCTCAACTGTCCCAAGAGAGTGATATCTATCACCAGATGGGGACTATGGCTAGTGCATCCCTCTCACAAGCTCTTCAACAAGAACGCTACCATGAGCTTGAGCAAAAGCAGCAAACACAACAACTTCAACAACAACAACAACAGCAACAACAAAATTTGATGGTTCCTATTCCGCTTGGAATCGAGCAGGAGCAAGATAGTGGTCTTCAACTGGTGCATCTGCTTCTAGCATGTGCTGAAGCAGTTGCAAAAGAGGAATACATGCTAGCAAGAAGGTACCTGCACCATCTCAACAGAGTAGTAACACCACTTGGAGACTCCATGCAACGAGTAGCTTCATGCTTCACCGAATCCCTAAGTGCAAGACTAGCCGCAACCCTCACCACAAAACCAGCAACAACCACCTCAAACCCCAACAACGTCTCATCAAACTCAATAGAAGTCCTCAAAATCTACCAAATTGTCTACCAAGCATGCCCTTACATCAAATTCGCCCACTTCACAGCCAATCAAGCCATCTTCGAAGCATTTGAAGCTGAAGAACGCGTACATGTCATCGATCTAGACATCCTCCAAGGCTATCAATGGCCGGCTTTCATGCAGGCCCTGGCTGCGCGACCCGGAGGAGCTCCCTTCCTCCGGATCACCGGCGTAGGGCCATGCATTGACTCAGTTAGGGAAACGGGTCGATGCTTAACCGAATTAGCACACTCTCTTCGCATACCTTTCGATTTCCACGCAGTTGGTGAGCAACTAGAGGATCTCAAGCCCCACATGTTCAACCGCCGAGTCGGCGAGGCCTTGGCGGTTAACTCCGTGAACCGCCTCCACCGCGTCCCCGGAAACTTCCTCGGAAACTTGTTGTCCATGATAAGGGACCAAGCGCCCAACATAGTAACCCTAGTGGAGCAAGAAGCTAGCCATAATGGACCATATTTCCTTGGTAGGTTCCTTGAGGCACTGCACTATTACTCAGCCATTTTTGATTCCTTGGACGCCACGTTTCCACCGGACTCGGCGCAGCGGGCCAAGGTGGAGCAGCACATTTTTGCGCCGGAGATAAGGAACATTGTGGCGTGTGAGGGTGCTGAGAGGATCGAGAGGCACGAGAGATTGGAGAAATGGAGGAAAATAATGGAAGGGAAAGGGTTCAAAGGGGTGCCACTAAGTCCCAACGCGGTGACTCAGTCAAAGATTTTGCTTGGTTTGTATTCTTGTGATGGATATAGGTTAACGGAGGATAAGGGTTGTTTGTTGCTGGGGTGGCAGGACAGAGCCATAATTGCTGCGTCTGCATGGCGGTGCTGA 1989 0.4716 MINSLCGSSVSLTSSNDSVLKSKKNATQSSADLEQASLTPPSLNLPSLKFDLDGDVEVQSPDSSMWESFFSDQLDADFMISSPVRNVPSPQASTYNCNYNYAQGAQCQSLSGCSPPRFSSQSGALNSSHKGKGLSPLHRVFNSPNSQYMQHIENLSLPAIEEFLEDYQGDGLGGGYPSTKVSSDIGSSSECFDMPTSIPSILDSLTMPNSSRYCGSVSEESSVHGGSSQLSQESDIYHQMGTMASASLSQALQQERYHELEQKQQTQQLQQQQQQQQQNLMVPIPLGIEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKPATTTSNPNNVSSNSIEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPCIDSVRETGRCLTELAHSLRIPFDFHAVGEQLEDLKPHMFNRRVGEALAVNSVNRLHRVPGNFLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQHIFAPEIRNIVACEGAERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3883g00032 662 Coils Coil 257 277 - -
Gabi3883g00032 662 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 255 656 IPR005202 -
Gabi3883g00032 662 MobiDBLite consensus disorder prediction 1 39 - -
Gabi3883g00032 662 Pfam GRAS domain family 298 661 IPR005202 -
Gabi3883g00032 662 ProSiteProfiles GRAS family profile. 289 661 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3883g00032 Gabi-Chr3883 422009 424361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3883g00032 292 662 GRAS Transcription Factor Family AT1G66350 44.828 1.05e-100 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3883g00032 GRAS 2.6e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3883g00032 - - pcin:129302477 1025