Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3883g00020 ATGGATCCCAAGGGCTCAAAGCAGCCACAAGCACAGGCACAGGAGTTACCCAACAATTTCCTGAGCCTCCCACAGCCACACCAACAACAACAAGGGAACATGGGAGAGAACAAGCCATCAGAGGTGAAGGATTTGCAGATTGTGATTGCTGAGAAAGAAGAGAACAAGAAGCTGCAGTTAGCACCAAAGAGGAGTTCCAACAAGGATAGACACACCAAGGTTGAAGGGAGAGGAAGGAGGATAAGGATGCCTGCTCTTTGTGCAGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCCGATGGAGAAACAATCCAGTGGCTTCTGCAGCAAGCTGAACCATCTATTATAGCAGCCACAGGAACTGGGACAATACCAGCATCTGCTTTGGCTGCTGCTGGTAACTCTGTTTCACAACAAGGGACCTCTTTATCTGCTGGGTTACACCAAAAGATTGATGAATTGGGAGGGTCCAATATTGGGTCAGGAAGTAGGACCAGCTGGACTATGGTTGGAGGAAATTTGGGGAGACCCCATGTGGCCACCACAGGTCTATGGCCCCCTATCAGTGGATTTGGATTTCAGTCATCATCTGGTCCATCTACACCAACTTTAGGCACTGAGAGTTCAAATTATCTGCAAAAGGTTGCATTTCCAGGGTTTGACTTGCCTGCTACCAACATGGGGCATATGAGTTTTACCTCAATTTTGGGTGGAGGTAACCAGCAGATGCCTGGTTTGGAGCTTGGTTTGTCTCAAGATGGCCATATTGGGGTTTTGAATCCACAAGCTTTGAGCCAGATTTATCAGCAGATGGGTCAAGCTAGAGTACACCAACAACAACAGCAACAGCAGCACCACCACCACCACCAGCATCAGCATCAGCAGCAGCCTCCTACTAAGGATGATTCCCAAGGTTCAGGACAGTAA 936 0.4808 MDPKGSKQPQAQAQELPNNFLSLPQPHQQQQGNMGENKPSEVKDLQIVIAEKEENKKLQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSQQGTSLSAGLHQKIDELGGSNIGSGSRTSWTMVGGNLGRPHVATTGLWPPISGFGFQSSSGPSTPTLGTESSNYLQKVAFPGFDLPATNMGHMSFTSILGGGNQQMPGLELGLSQDGHIGVLNPQALSQIYQQMGQARVHQQQQQQQHHHHHQHQHQQQPPTKDDSQGSGQ 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3883g00020 311 MobiDBLite consensus disorder prediction 45 76 - -
Gabi3883g00020 311 MobiDBLite consensus disorder prediction 7 37 - -
Gabi3883g00020 311 MobiDBLite consensus disorder prediction 273 311 - -
Gabi3883g00020 311 MobiDBLite consensus disorder prediction 1 76 - -
Gabi3883g00020 311 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Gabi3883g00020 311 Pfam TCP family transcription factor 66 280 IPR017887 -
Gabi3883g00020 311 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 301 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3883g00020 Gabi-Chr3883 234265 236176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3883g00020 40 311 TCP Transcription Factor Family AT3G27010 61.649 1.12e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi3883g00020 TCP 3.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3883g00020 - - cave:132180810 483.796