Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3883g00007 ATGGCCACCTCTTTAAAACCACCGATTGGGTTGCGCTTCCTCAAACCACCACCGCTTTCCGCCGCAACCACCGTATCGTTCAAGTTTCCAACAACTCAGCTTCTCAGAATCAACTGCGCGTACTCCTCTTTCGAAGTTAGAGATGTTAGCTATCAACCCCCCGGGACTCAGCTCAGACTTCTAAATTCAGTTAGTTTTTCACTTCCGGAAAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGCGGAAAAACAACTCTCTTGCAGCTTCTTGCAGGAATAAGCAAACCAACCTCTGGATCTATTTACACCCAAAAATATGGGAATGATGGAAGTCCTAGTGGATCTCCCGAGCCCTTGGTGTCAGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTGGCTGATAATGTGCTTGATGAGGTCACTTTTGGGTGGCCAAGGCAAAAGCATAGCTATCAATTAAGGGAGAATCTTGCTCTAGGGCTACAAAGGGCAATTAACTGGGTTGGATTAAATGGAATACCATTGGATAAAAATCCTCACTCCCTCAGTGGTGGTTACAAACGTCGACTTGCTTTGGCAATACAATTAGTGCAAATCCCTGATTTATTGATATTGGATGAGCCTCTTGCTGGACTTGATTGGAAAGCACGCGCAGATGTTGTGAAGCTTTTGAAGCATCTAAAAAAAGAATTAACTGTGCTTGTTGTCAGCCATGATTTGAGAGAGTTCGCAAGTCTAGTTGATCGATCATGGAGGATGGAAATGGGTGGCAACCTTAGAGAGGAGTTTTTACCATTATAA 816 0.4375 MATSLKPPIGLRFLKPPPLSAATTVSFKFPTTQLLRINCAYSSFEVRDVSYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYTQKYGNDGSPSGSPEPLVSERVGIVFQFPERYFVADNVLDEVTFGWPRQKHSYQLRENLALGLQRAINWVGLNGIPLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLPL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3883g00007 271 FunFam ABC transporter I family member 11 chloroplastic 33 269 - -
Gabi3883g00007 271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 269 IPR003439 GO:0005524
Gabi3883g00007 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 261 IPR027417 -
Gabi3883g00007 271 CDD ABC_cobalt_CbiO_domain1 45 261 IPR015856 GO:0005524|GO:0016020|GO:0055085
Gabi3883g00007 271 SMART AAA_5 70 262 IPR003593 GO:0016887
Gabi3883g00007 271 PANTHER HEAVY METAL TRANSPORTER 45 268 - -
Gabi3883g00007 271 Gene3D - 35 268 IPR027417 -
Gabi3883g00007 271 Pfam ABC transporter 61 214 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3883g00007 Gabi-Chr3883 119881 154296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3883g00007 45 245 Calmodulin-binding Proteins AT2G36910 24.766 4.14e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3883g00007 - - vun:114196181 463.766