Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3878g00037 ATGGCTCGGGATGGGAGTGTTGTTCCTGCGGACCCACAGGCCATGGCGGTTCTGAAGAAGAAGACACAATCTTCGAGGAGTTGGATTCTATTTGATAGCACTGGCCAAGGTTCATTGCTTGACGTCGACAAGTATGCCATCATGCACAGGGTTCAGATTCACGCTCGTGATCTAAGAATTCTTGATCCCTTGCTCTCTTACCCCTCTACCATTCTGGGTCGTGAGAAGGCCATTGTTATTAACTTGGAGCATATCAAAGCAATTATCACAGCCGAAGAGGTATTGCTACGAGATCCAACAGATGAAAATGTGGTCCCTGTTGTTGAGGAACTGCAAAGGAGATTGCCTCAAGTAAGTGCCATTCATCAACAGCAAGGAGATGGTAAAGAGTATATTGATGGTCAACATGATACTGAAGCAGCCGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTCGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCAAAGATTAGTAGTCGTAATTTGGATAGAGTTCGTAAACTAAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACTTGTCAAGAAAGTTGGCATGTTCATCATCACCAGTTAGCGGATCAGGTCCTGCAAATTGGTTTGCTGCCTCCCCCACCATAGGATCAAAGATATCCAGAGCAAGTAGAGCAAGCATATCCAGAGCAAGTAGAGCAAGTGTAGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGAAGGCACCTTGAACAAATTAACCACACTACGAGAGTATATTGATGATACTGAAGATTATATTAATATTCAACTTGACAACCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCCGGAACTGTTTGTCTATCTTTCTACTCTTTGGTGGCTGCTATTTTTGGCATGAATATACCATATACTTGGAATGACGACCATGGTTACATGTTCAAATGGGTAGTTATTGTCTCAGGAGTATTTTCTGCTGTTATGTTTCTCCTGATTACTGCCTATGCTCGCAAAAAGGGGTTGGTTGGATCATGA 1209 0.4293 MARDGSVVPADPQAMAVLKKKTQSSRSWILFDSTGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPQVSAIHQQQGDGKEYIDGQHDTEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLACSSSPVSGSGPANWFAASPTIGSKISRASRASISRASRASVATVRLDENDVEELEMLLEAYFMQIEGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIPYTWNDDHGYMFKWVVIVSGVFSAVMFLLITAYARKKGLVGS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3878g00037 402 FunFam Magnesium transporter MRS2-1 16 99 - -
Gabi3878g00037 402 CDD Mrs2_Mfm1p-like 28 399 IPR039204 -
Gabi3878g00037 402 Gene3D Magnesium transport protein CorA, transmembrane region 106 332 - -
Gabi3878g00037 402 Gene3D - 13 99 - -
Gabi3878g00037 402 Pfam CorA-like Mg2+ transporter protein 278 390 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gabi3878g00037 402 Coils Coil 194 221 - -
Gabi3878g00037 402 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 338 390 IPR045863 -
Gabi3878g00037 402 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 400 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3878g00037 Gabi-Chr3878 439242 457183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3878g00037 1 375 MRS2 Gene Family AT5G64560 79.787 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3878g00037 K16075 - gmx:100810239 672.159