Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3878g00036 ATGGCTCGGGATGGGAGTGTTGTTCCTGCGGACCCACAGGCCATGGCGGTTCTGAAGAAGAAGACACAATCTTCGAGGAGTTGGATTCTATTTGATAGCACTGGCCAAGGTTCATTGCTTGACGTCGACAAGTATGCCATCATGCACAGGGTTCAGATTCACGCTCGTGATCTAAGAATTCTTGATCCCTTGCTCTCTTACCCCTCTACCATTCTGGGTCGTGAGAAGGCCATTGTTATTAACTTGGAGCATATCAAAGCAATTATCACAGCCGAAGAGGTATTGCTACGAGATCCAACAGATGAAAATGTGGTCCCTGTTGTTGAGGAACTGCAAAGGAGATTGCCTCAAGTAAGTGCCATTCATCAACAGCAAGGAGATGGTAAAGAGTATATTGATGGTCAACATGATACTGAAGCAGCCGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTCGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCAAAGATTAGTAGTCGTAATTTGGATAGAGTTCGTAAACTAAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACTTGTCAAGAAAGTTGGCATGTTCATCATCACCAGTTAGCGGATCAGGTCCTGCAAATTGGTTTGCTGCCTCCCCCACCATAGGATCAAAGATATCCAGAGCAAGTAGAGCAAGCATATCCAGAGCAAGTAGAGCAAGTGTAGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTACTCGAGCTACGAGAGTATATTGATGATACTGAAGATTATATTAATATTCAACTTGACAACCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCCGGAACTGTTTGTCTATCTTTCTACTCTTTGGTGGCTGCTATTTTTGGCATGAATATACCATATACTTGGAATGACGACCATGGTTACATGTTCAAATGGGTAGTTATTGTCTCAGGAGTATTTTCTGCTGTTATGTTTCTCCTGATTACTGCCTATGCTCGCAAAAAGGGGTTGGTTGGATCATGA 1164 0.4321 MARDGSVVPADPQAMAVLKKKTQSSRSWILFDSTGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPQVSAIHQQQGDGKEYIDGQHDTEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLACSSSPVSGSGPANWFAASPTIGSKISRASRASISRASRASVATVRLDENDVEELEMLLELREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIPYTWNDDHGYMFKWVVIVSGVFSAVMFLLITAYARKKGLVGS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3878g00036 387 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 385 IPR039204 -
Gabi3878g00036 387 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 323 375 IPR045863 -
Gabi3878g00036 387 FunFam Magnesium transporter MRS2-1 16 99 - -
Gabi3878g00036 387 Pfam CorA-like Mg2+ transporter protein 289 375 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gabi3878g00036 387 CDD Mrs2_Mfm1p-like 28 384 IPR039204 -
Gabi3878g00036 387 Coils Coil 194 221 - -
Gabi3878g00036 387 Gene3D Magnesium transport protein CorA, transmembrane region 106 317 - -
Gabi3878g00036 387 Gene3D - 13 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3878g00036 Gabi-Chr3878 439242 457185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3878g00036 1 360 MRS2 Gene Family AT5G64560 76.596 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3878g00036 K16075 - gmx:100810239 623.624