Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3878g00035 ATGGCTCGGGATGGGAGTGTTGTTCCTGCGGACCCACAGGCCATGGCGGTTCTGAAGAAGAAGACACAATCTTCGAGGAGTTGGATTCTATTTGATAGCACTGGCCAAGGTTCATTGCTTGACGTCGACAAGTATGCCATCATGCACAGGGTTCAGATTCACGCTCGTGATCTAAGAATTCTTGATCCCTTGCTCTCTTACCCCTCTACCATTCTGGGTCGTGAGAAGGCCATTGTTATTAACTTGGAGCATATCAAAGCAATTATCACAGCCGAAGAGGTATTGCTACGAGATCCAACAGATGAAAATGTGGTCCCTGTTGTTGAGGAACTGCAAAGGAGATTGCCTCAAGTAAGTGCCATTCATCAACAGCAAGGAGATGGTAAAGAGTATATTGATGGTCAACATGATACTGAAGCAGCCGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTGGAGGTAGCTTTAGAAGCCATTTGTAGTTTTCTCGCTGCACGTACAACAGAATTGGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCAAAGATTAGTAGTCGTAATTTGGATAGAGTTCGTAAACTAAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGAGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACTTGTCAAGAAAGTTGGCATGTTCATCATCACCAGTTAGCGGATCAGGTCCTGCAAATTGGTTTGCTGCCTCCCCCACCATAGGATCAAAGATATCCAGAGCAAGTAGAGCAAGCATATCCAGAGCAAGTAGAGCAAGTGTAGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGAAGGCACCTTGAACAAATTAACCACACTTGACAACCATCGTAATCAGCTGATTCAGTTAGAGCTCTTTCTTAGCTCCGGAACTGTTTGTCTATCTTTCTACTCTTTGGTGGCTGCTATTTTTGGCATGAATATACCATATACTTGGAATGACGACCATGGTTACATGTTCAAATGGGTAGTTATTGTCTCAGGAGTATTTTCTGCTGTTATGTTTCTCCTGATTACTGCCTATGCTCGCAAAAAGGGGTTGGTTGGATCATGA 1164 0.4364 MARDGSVVPADPQAMAVLKKKTQSSRSWILFDSTGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVINLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPQVSAIHQQQGDGKEYIDGQHDTEAAEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLACSSSPVSGSGPANWFAASPTIGSKISRASRASISRASRASVATVRLDENDVEELEMLLEAYFMQIEGTLNKLTTLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIPYTWNDDHGYMFKWVVIVSGVFSAVMFLLITAYARKKGLVGS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3878g00035 387 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 385 IPR039204 -
Gabi3878g00035 387 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 323 375 IPR045863 -
Gabi3878g00035 387 FunFam Magnesium transporter MRS2-1 16 99 - -
Gabi3878g00035 387 CDD Mrs2_Mfm1p-like 28 384 IPR039204 -
Gabi3878g00035 387 Gene3D Magnesium transport protein CorA, transmembrane region 106 321 - -
Gabi3878g00035 387 Coils Coil 194 221 - -
Gabi3878g00035 387 Gene3D - 13 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3878g00035 Gabi-Chr3878 439242 457185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3878g00035 1 360 MRS2 Gene Family AT5G64560 75.798 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3878g00035 K16075 - gmx:100810239 631.713