Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3868g00001 ATGGTGGTGGTGGTTGGTGGCGGTGGCGGTAATGGCTGCCGCAATGGTAGTGGTGGTCAGGACTTGACGGGTTTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAATGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGATTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAA 345 0.4783 MVVVVGGGGGNGCRNGSGGQDLTGLAGSPAYVAPEVLLGRYSEKADIWNAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLDFQTGMWESISKPARDLVGRMLTRDISARITADE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3868g00001 115 SUPERFAMILY Protein kinase-like (PK-like) 22 115 IPR011009 -
Gabi3868g00001 115 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3868g00001 115 Pfam Protein kinase domain 17 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3868g00001 115 Gene3D Transferase(Phosphotransferase) domain 1 11 115 - -
Gabi3868g00001 115 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3868g00001 Gabi-Chr3868 4543 6644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3868g00001 19 115 EF-hand Containing Proteins AT4G35310 48.454 9.24e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi3868g00001 Pkinase 8.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3868g00001 - - qsa:O6P43_019591 170.629