Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00062 ATGCTCTCTGCTCTTCCTGCTTCCGACACTTTGTTCGGAAACCCATTCTCGGCGTTCGACGGCTGTTTCACGCCGTGGGATGGCCCTGACTTTTGTTTGGCCTTCAAGCCCAACAGCCCCAAGCCCGTTACTTCAAGCTCCGGTTCGGACGACCCCAACAAAACCCATGTCGCATCCGTTATGGACGAGCGAAGGCGAAGGCGAATGATATCGAACCGGGAATCCGCAAGGAGGTCACGTATGCGTAAACAGAAGCATCTAGAGAACTTACGGAACCAGGTGAACCTGGTTAGGATCGAAAACCGGGAACTTAGCAACGGGTTGCAATTCCTCCTGCATCACTGTGACCGCGTACGAACCGAAAACGATTGGCTCCGGTCCGAGCGAACCAGGCTCCGGCAAAAATTGTCCAACATAAGTCAAATTTTGGTTTTACAACAATTGCAACCCTCCTCTGCATGGCCATGCAATGTTGTCACAGCGGAATAA 489 0.5215 MLSALPASDTLFGNPFSAFDGCFTPWDGPDFCLAFKPNSPKPVTSSSGSDDPNKTHVASVMDERRRRRMISNRESARRSRMRKQKHLENLRNQVNLVRIENRELSNGLQFLLHHCDRVRTENDWLRSERTRLRQKLSNISQILVLQQLQPSSAWPCNVVTAE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00062 162 PANTHER BZIP TRANSCRIPTION FACTOR 44 42 146 - -
Gabi3865g00062 162 MobiDBLite consensus disorder prediction 40 83 - -
Gabi3865g00062 162 SMART brlzneu 60 124 IPR004827 GO:0003700|GO:0006355
Gabi3865g00062 162 SUPERFAMILY Leucine zipper domain 64 114 IPR046347 GO:0003700|GO:0006355
Gabi3865g00062 162 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 67 82 IPR004827 GO:0003700|GO:0006355
Gabi3865g00062 162 CDD bZIP_plant_GBF1 69 116 IPR045314 GO:0003700|GO:0006355
Gabi3865g00062 162 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 62 125 IPR004827 GO:0003700|GO:0006355
Gabi3865g00062 162 Pfam bZIP transcription factor 64 122 IPR004827 GO:0003700|GO:0006355
Gabi3865g00062 162 Coils Coil 73 107 - -
Gabi3865g00062 162 MobiDBLite consensus disorder prediction 56 77 - -
Gabi3865g00062 162 MobiDBLite consensus disorder prediction 40 54 - -
Gabi3865g00062 162 FunFam BZIP transcription factor 62 113 - -
Gabi3865g00062 162 Gene3D - 62 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00062 Gabi-Chr3865 502113 502614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3865g00062 11 147 bZIP Transcription Factor Family AT3G49760 42.361 2.20e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3865g00062 bZIP_1 4.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00062 - - gmx:102661188 216.468