Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00041 ATGGCTTCTTCCTTATCGTGTTGTTACAAATTCCTTCTATATCCTCTTAAGTTTTGTGATTTCAATGAAGTATGCTGTTCTTCTCACAACCCACAAGCGAAGCTAAAATATAAATCTCGTTCCCCAAAACAATCGCCTTTGGCGGTCCATTTCGCTAACCGAAAGAAGGGAGTGTCAACGAAATGCAATGTGTTGAGCGAAGGAGTGAATGGGAGCGTGGAAGATGAGAGCTTCAATAACTCAAATCTTGAGGATAAGCAATTCGTGCGTTCCTTTCGCGAGGCATGGCCTTACTTGTGGGCCTTTCGTGGCAATACCTTTGTTGTTATTATTTCCGGTGAAATTGTCTCTAGTCCTTTCTTGGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGTACCCATGTGCAAATAGATAAGCTTTTGACTGAGAGAGGGAGCCAGCCTAAGTACGTTGGTAGATATAGAATAACTGATGATGAATCTCTAGAAGCTGCAATGGAAGCAGCTGGGGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGTAATATTCGTCGACATGGTGACAATAGTCGTTGGCATGAAGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAGTGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGATGCATCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGACAAGTATTAAATTGCAACACCTATGAAGTTGCAACTGCTTGTGCCTTAGCTATAGGAGCGGACAAGCTAATATGCATTATAGATGGTCCAATACTTGATGAGAGCGGACGCCTAATCCGTTTCTTACCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGGGCTGAGCAAAGTGAAACAGCTGCTAACTATGTGAAAGCCGTTGATGAAGAAGGTTTCAACTCTCTTGAGCATAGAAGTTTTAATGGGACAGTCCAATCTCCACCTAATGGAAAACCTTTTACAGAATGGCATAATAATGCAACCTTCCATAATGGTGTTGGTTTTGACAATGGAAATGGCTTAGAGTCTGGTGAGCAAGGTTTTGCTATCGGAGGTCAAGAGCGACTTAGTAGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGATGGCACAGGTAAAAGATATTTCTGGGATAAAACAAATTATTCAGCCCTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGGAGAGCTGCTACAAACGTTGGATTCTTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCCCTCTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGAATATGCTTTTCCTGCTCACAACTCGGACAGCTGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGACTATATCCCTGAAAAGAAGAGGAAAATGATCAATCTGTCCCGCAATTCCAAGTATTATATGAAGAAGCTTCTACCTAATAAAAGTGGAATTATTGTCGGTAGAAAATTTGCTTCAAATTAG 1854 0.4234 MASSLSCCYKFLLYPLKFCDFNEVCCSSHNPQAKLKYKSRSPKQSPLAVHFANRKKGVSTKCNVLSEGVNGSVEDESFNNSNLEDKQFVRSFREAWPYLWAFRGNTFVVIISGEIVSSPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLTERGSQPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVSGIDFGSTGEVKKVDASRMRERLDGGCIVILTNLGYSSSGQVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRFLPLQEADMLIRKRAEQSETAANYVKAVDEEGFNSLEHRSFNGTVQSPPNGKPFTEWHNNATFHNGVGFDNGNGLESGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVKDISGIKQIIQPLEASGILVKRTDGELLQTLDSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKMINLSRNSKYYMKKLLPNKSGIIVGRKFASN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00041 617 CDD NAT_SF 496 558 - -
Gabi3865g00041 617 Gene3D - 455 601 - -
Gabi3865g00041 617 SUPERFAMILY Carbamate kinase-like 86 322 IPR036393 -
Gabi3865g00041 617 Pfam Acetyltransferase (GNAT) family 494 560 IPR000182 GO:0016747
Gabi3865g00041 617 SUPERFAMILY Carbamate kinase-like 403 451 IPR036393 -
Gabi3865g00041 617 Pfam Amino acid kinase family 106 322 IPR001048 -
Gabi3865g00041 617 CDD AAK_NAGS-ABP 87 449 IPR033719 -
Gabi3865g00041 617 Hamap Amino-acid acetyltransferase [argA]. 87 601 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00041 617 Gene3D - 86 454 IPR036393 -
Gabi3865g00041 617 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 455 603 IPR000182 GO:0016747
Gabi3865g00041 617 NCBIfam amino-acid N-acetyltransferase 410 601 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00041 617 PANTHER AMINO-ACID ACETYLTRANSFERASE 38 608 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00041 617 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 483 604 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00041 Gabi-Chr3865 364438 370267 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi3865g00041 AA_kinase 5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00041 K14682 - gmx:100777694 945.651