Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00040 ATGGAAAAATCTAACACTGCTACAGCATATGAAAAGGAGAAGAAGGAAGGACGAAGAATTAAGACGGAGATGTTGTCCAAATACCGATCGATCTTCAAATCTCCCCTCTTTTTATCTCTACCAATGTCCAATACCATTTCTACCGTCAGAAACAAAACCAGTGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGTACCCATGTGCAAATAGATAAGCTTTTGACTGAGAGAGGGAGCCAGCCTAAGTACGTTGGTAGATATAGAATAACTGATGATGAATCTCTAGAAGCTGCAATGGAAGCAGCTGGGGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGTAATATTCGTCGACATGGTGACAATAGTCGTTGGCATGAAGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAGTGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGATGCATCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGACAAGTATTAAATTGCAACACCTATGAAGTTGCAACTGCTTGTGCCTTAGCTATAGGAGCGGACAAGCTAATATGCATTATAGATGGTCCAATACTTGATGAGAGCGGACGCCTAATCCGTTTCTTACCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGGGCTGAGCAAAGTGAAACAGCTGCTAACTATGTGAAAGCCGTTGATGAAGAAGGTTTCAACTCTCTTGAGCATAGAAGTTTTAATGGGACAGTCCAATCTCCACCTAATGGAAAACCTTTTACAGAATGGCATAATAATGCAACCTTCCATAATGGTGTTGGTTTTGACAATGGAAATGGCTTAGAGTCTGGTGAGCAAGGTTTTGCTATCGGAGGTCAAGAGCGACTTAGTAGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGATGGCACAGGTAAAAGATATTTCTGGGATAAAACAAATTATTCAGCCCTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATGGAGAGCTGCTACAAACGTTGGATTCTTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCCCTCTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGAATATGCTTTTCCTGCTCACAACTCGGACAGCTGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGACTATATCCCTGAAAAGAAGAGGAAAATGATCAATCTGTCCCGCAATTCCAAGTATTATATGAAGAAGCTTCTACCTAATAAAAGTGGAATTATTGTCGGTAGAAAATTTGCTTCAAATTAG 1638 0.4194 MEKSNTATAYEKEKKEGRRIKTEMLSKYRSIFKSPLFLSLPMSNTISTVRNKTSDIAFLHHLGIRFVLVPGTHVQIDKLLTERGSQPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVSGIDFGSTGEVKKVDASRMRERLDGGCIVILTNLGYSSSGQVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRFLPLQEADMLIRKRAEQSETAANYVKAVDEEGFNSLEHRSFNGTVQSPPNGKPFTEWHNNATFHNGVGFDNGNGLESGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVKDISGIKQIIQPLEASGILVKRTDGELLQTLDSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYMEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKMINLSRNSKYYMKKLLPNKSGIIVGRKFASN 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00040 545 Hamap Amino-acid acetyltransferase [argA]. 50 529 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00040 545 Gene3D - 383 529 - -
Gabi3865g00040 545 CDD AAK_NAGS-ABP 54 377 IPR033719 -
Gabi3865g00040 545 SUPERFAMILY Carbamate kinase-like 331 379 IPR036393 -
Gabi3865g00040 545 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 383 531 IPR000182 GO:0016747
Gabi3865g00040 545 Pfam Amino acid kinase family 50 254 IPR001048 -
Gabi3865g00040 545 CDD NAT_SF 424 486 - -
Gabi3865g00040 545 PANTHER AMINO-ACID ACETYLTRANSFERASE 52 536 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00040 545 NCBIfam amino-acid N-acetyltransferase 337 529 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00040 545 SUPERFAMILY Carbamate kinase-like 48 250 IPR036393 -
Gabi3865g00040 545 Gene3D - 42 382 IPR036393 -
Gabi3865g00040 545 PIRSF ArgA 42 529 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi3865g00040 545 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 411 532 IPR016181 -
Gabi3865g00040 545 Pfam Acetyltransferase (GNAT) family 422 488 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00040 Gabi-Chr3865 364438 371487 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi3865g00040 AA_kinase 4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00040 K14682 - gmx:100777694 899.042