Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00030 ATGGATACGTTGTTTAGGCTAGTGAATTTTCCACACCAAGAAGATCATCAATCCCTCAACTCCACAACCACCACCACCACCACCAGAACAACATCTAGCAGCTCTAGATCCTCGACACAAAACTATCATCACTACTTCCAACAACAACAAGACGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGATGACTTATCCTCCTCTTCTTCCAAACACTACGTCTATCCTTATCAACCCCACCCATCCACCTCCACTACCACTACCACTAACACTAACACTAACACCAACACACCCACCCCCACCACAACCACAACCACTGATTTCTCCTTCAACTTCAACTTGGAATTCTCAACCGGCAAGTGGGCCCAGGACATCCTCCTCGAAACAGCACGTGCCATTGCTGAGAAGAACAGCGCTCGTATTAACCAACTCATGTGGATGCTCAACGAGCTAAGCTCACCTTACGGTGACACGGATCAAAAACTCGCTTCCTACTTCCTCCAAGCCTTGTTTAGCCGCATGACCGAAGCAGGTGACCGAACCTACCGAACCTTAGCCTCCGCATCGGAGAAAACATGCTCCTTCGAATCGACGAGGAAGACGGTGTTGAAGTTCCAAGAGGTGAGCCCATGGACAACATTCGGCCACGTGGCTTGCAATGGTGCCATCTTGGAGGCCTTAGAAGGACACCAAAAGTTGCATATAATTGACATTAGCAACACCTATTGCACCCAATGGCCTACCCTCTTCGAAGCATTGGCCACTCGCAACGACGACACACCACACCTCCGTCTGACCACCGTCGTCACCGCCACTCCCGGTGGCTCCGTTCAAAAAGTCATGAAGGAGATAGGCACCAGGATGGAAAAATTCGCCAGGCTCATGGGTGTTCCCTTTAAATTCAATGTCGTTCATCATTCCGGTCATCTTTCCGACTTGGATTTCTCCGAATTAGACATTAAGGACGATGAGGCCTTGGCTATTAACTGTGTCAACGCTTTCCATTCGATCACAGCCGTTGGTAACCACCGTGACGTGTTGATATCTTCGTTATGCAGGTTGCAACCGAGGATTGTGACCGTTGTGGAAGAGGAAGCTGACCTTGATGTGGGTTTTGAAGGGTTTGAGTTTGTGAAAGGTTTCCAAGAATGCTTGAGATGGTTTAGGGTTTACTTTGAGGCTTTGGATGAGAGTTTCTCGAGGACGAGCAATGAACGTTTGATGCTTGAACGAGCGGCGGGGAGAGCCATCGTTGATTTGATCGCCTGTGCTCCGTCAGACTCCATGGAGCGGCGTGAAACGGCGTCGCGGTGGTCGCAGCGTCTGCATGGGGGTGGCTTCAATACTGTGCCGTTTAGCGAGGAGGTTTGCGATGATGTGAGAGCACTTTTGAGGAGGTACAAGGAGGGTTGGTCAATGACACAGTGCTCCGACACCGGAATATTCTTGTCGTGGAAGGATCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1497 0.5003 MDTLFRLVNFPHQEDHQSLNSTTTTTTTRTTSSSSRSSTQNYHHYFQQQQDEEECFNFFMDEDDLSSSSSKHYVYPYQPHPSTSTTTTTNTNTNTNTPTPTTTTTTDFSFNFNLEFSTGKWAQDILLETARAIAEKNSARINQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTEAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGHQKLHIIDISNTYCTQWPTLFEALATRNDDTPHLRLTTVVTATPGGSVQKVMKEIGTRMEKFARLMGVPFKFNVVHHSGHLSDLDFSELDIKDDEALAINCVNAFHSITAVGNHRDVLISSLCRLQPRIVTVVEEEADLDVGFEGFEFVKGFQECLRWFRVYFEALDESFSRTSNERLMLERAAGRAIVDLIACAPSDSMERRETASRWSQRLHGGGFNTVPFSEEVCDDVRALLRRYKEGWSMTQCSDTGIFLSWKDQPVVWASAWRP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00030 498 ProSiteProfiles GRAS family profile. 113 497 IPR005202 -
Gabi3865g00030 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 96 490 IPR005202 -
Gabi3865g00030 498 MobiDBLite consensus disorder prediction 15 41 - -
Gabi3865g00030 498 MobiDBLite consensus disorder prediction 77 104 - -
Gabi3865g00030 498 Pfam GRAS domain family 124 497 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00030 Gabi-Chr3865 326422 328458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3865g00030 1 498 GRAS Transcription Factor Family AT4G37650 60.935 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3865g00030 GRAS 3.5e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00030 - - qsa:O6P43_033912 744.962