Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00019 ATGGGAAGCTCTGGCACCACCTTTTCTTTGTCTAGCCTCATGTGTGAAGAAGGTGAAGATAGCTTCTTTGAAGCCGAAGATGAACACGCTGGCATTGACTCACTTGATAACCCATGTTTTGTTTTTGAGGACGATGAAGAGGAATACATTGAGTTTTTGTTCGGACAAGAAATGGGTTTCGGATCCCATAATCATTTCTTGTCCTCTGATGATTATTCAAGCAGATACTGGTTGAGGAGTGCTCGTATGGATGCCATTGACTGGATTTTCAATACACAAGCAAGATTTGGATTCAAAATTCAGACAGCTTATTTATCAGTGACTTACTTTGATCGCTTTCTTTCAAAGAGATCCATCGATGAATCCAAACCTTGGGCTATTCAATTATTATCAGTGGCAAGTTTATCCCTGGCAGCAAAGATGGAAGAGCAAAAGGTGCCGCCTCTATCTGAATATCCAATAGCAGAATATCGCTTTGAGAACAAAGTTATTAAGAACATGGAACTTCTGATTTTGTGTACCTTGGAATGGAAAATGGGATCAGCAACTCCATTTTCTTACTTGCATTACTTTGTCAGCAAGTTCTGCCCTGGATCCAGACCTGAAACAATAATCACAAAAGCCACGGAACATATTGTGGCTATGGTCAAAGATGTTAATTTGATGGATCAACGGCCATCTATAATTGCCTCTGCTGCCATATTGGCAGCTTTTGATGCTACATTAACAAGAAAGGCCATGGATCTTCGAATAAGCGTAATCTCATCATGGGGAAATCTAGAAAGTGGACATGTTTTTTCCTGCTACAGTCTAATACAGGAAAAGAGGAGAAACAACGTTAAGACACCATCCTCGATTTTATTGTCAACCCAGACGGGCTCCACGTGTGTTCTTGAGAACCCATCTGAAACTTCTTTCGGAGCTAAGAGAAAACTTACTTTTGAGGACAGTGAATTTTGTCCGGAACAAAAGTTACATCGGCCTTAG 987 0.4063 MGSSGTTFSLSSLMCEEGEDSFFEAEDEHAGIDSLDNPCFVFEDDEEEYIEFLFGQEMGFGSHNHFLSSDDYSSRYWLRSARMDAIDWIFNTQARFGFKIQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVASLSLAAKMEEQKVPPLSEYPIAEYRFENKVIKNMELLILCTLEWKMGSATPFSYLHYFVSKFCPGSRPETIITKATEHIVAMVKDVNLMDQRPSIIASAAILAAFDATLTRKAMDLRISVISSWGNLESGHVFSCYSLIQEKRRNNVKTPSSILLSTQTGSTCVLENPSETSFGAKRKLTFEDSEFCPEQKLHRP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00019 328 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Gabi3865g00019 328 Pfam Cyclin, N-terminal domain 78 179 IPR006671 -
Gabi3865g00019 328 Pfam Cyclin, C-terminal domain 183 279 IPR004367 -
Gabi3865g00019 328 FunFam Uncharacterized protein 181 245 - -
Gabi3865g00019 328 SMART cyclin_7 87 173 IPR013763 -
Gabi3865g00019 328 SUPERFAMILY Cyclin-like 38 179 IPR036915 -
Gabi3865g00019 328 CDD CYCLIN_AtCycD-like_rpt1 81 177 - -
Gabi3865g00019 328 PANTHER CYCLINS 46 278 IPR039361 -
Gabi3865g00019 328 Gene3D - 181 241 - -
Gabi3865g00019 328 Gene3D - 79 180 - -
Gabi3865g00019 328 FunFam Cyclin-D5-1 77 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00019 Gabi-Chr3865 246783 248228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3865g00019 9 262 Core Cell Cycle Gene Families AT4G37630 36.466 3.42e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00019 K18811 - gmx:100798140 497.664