Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00015 ATGGACGGCAATTGTTGTAAATCTCTCCAGAATGACAAGAAATTCACTCTGGCACCACCTCCTTTGCCACGTTCTGCAGCAACAGTTTATCCCTGCAAGCGTTTGGTGACGAACTATTCAGCACCAAGCGGGCACAGCAGCTATGTCTTTTCAGCAACAAGAGATTTGTGGGAGCGTCTTTTTTATGAAGGTTATAAAGCAGATGTTCGCATTAATACTGTTAACGGTGGCATTGTTTATGCTCATTCTAACATTCTTGCCATGGCTTCTCCCGTAATGAGAGGCATGCTGGAACAAGCAAATCGTCATCATCATCGATGGCGATCAATCTCAATCTTTGGTGTTCCACATGATGCAGTTCGAGTGTTTATTCGTTTCTTGTACTCTTCCTGTTTTGAGAAAGAAGAAATGGAGGAATTCATCCTGCATTTGTTGGTATTGTCACATGTATTCGTGGTCCCTCACTTGAAGCGTGAATGTGAACGGAAACTAGAATTGGGTTTACTCACTACAGATAATGTAGTTGATGTATTTCAACTTGCATTACTATGTGATGCCCCACGGCTCAGCCTCATTTGCCACCGAATGATTCTAAAAAACTTTAAAGCTGTTTCGGAGTCAGAAGGATGGAAAACAATGAAGCAGAGCCACCCTGTTCTAGAAAAGGAAGTTCTGGAGTCAGTGATTGAAGAAGAAAATAGTAAAAATGAGAGGATCAGAAAAATCAATGAAAGAAAGATATATCTGCAATTATACGAAGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGTCCTTACGATAAAGACTTCAAAGCAAACCAACCGTGTAGGTATGTAGCATGCAAGGGGCTAGAATTACTTGTCCGTCATTTTGCTGGGTGCAAGTTGAGAGTCCCAGGAGGTTGTGTTCTTTGCAAGAGGATGTGGCAATTGTTGGAGCTACACTCCCGATTATGTGCTGATCCAGATAACTGCAGAGTTCCTTTGTGCGGGAACTTTAAGCAGCGAATATCAAAACAAAGCAAGAAAGAGGAAATTAGGTGGAAAATATTGGTTGAGAAGATCTTGAGAACAAGAGGCACTGGGATAGCACCGTGCTTTCCACCACAATAA 1131 0.4191 MDGNCCKSLQNDKKFTLAPPPLPRSAATVYPCKRLVTNYSAPSGHSSYVFSATRDLWERLFYEGYKADVRINTVNGGIVYAHSNILAMASPVMRGMLEQANRHHHRWRSISIFGVPHDAVRVFIRFLYSSCFEKEEMEEFILHLLVLSHVFVVPHLKRECERKLELGLLTTDNVVDVFQLALLCDAPRLSLICHRMILKNFKAVSESEGWKTMKQSHPVLEKEVLESVIEEENSKNERIRKINERKIYLQLYEAMEALVHICRDGCRTIGPYDKDFKANQPCRYVACKGLELLVRHFAGCKLRVPGGCVLCKRMWQLLELHSRLCADPDNCRVPLCGNFKQRISKQSKKEEIRWKILVEKILRTRGTGIAPCFPPQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00015 376 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 36 367 IPR044513 -
Gabi3865g00015 376 Gene3D - 169 243 - -
Gabi3865g00015 376 FunFam BTB/POZ and TAZ domain-containing protein 2 242 366 - -
Gabi3865g00015 376 SMART BTB_4 67 168 IPR000210 GO:0005515
Gabi3865g00015 376 SUPERFAMILY TAZ domain 245 345 IPR035898 -
Gabi3865g00015 376 Pfam TAZ zinc finger 252 336 IPR000197 -
Gabi3865g00015 376 Gene3D Potassium Channel Kv1.1; Chain A 48 166 IPR011333 -
Gabi3865g00015 376 Gene3D TAZ domain 244 364 IPR035898 -
Gabi3865g00015 376 SMART TAZ_2 245 337 IPR000197 -
Gabi3865g00015 376 Pfam BTB/POZ domain 65 164 IPR000210 GO:0005515
Gabi3865g00015 376 ProSiteProfiles BTB domain profile. 67 136 IPR000210 GO:0005515
Gabi3865g00015 376 CDD BACK 170 230 - -
Gabi3865g00015 376 FunFam BTB/POZ and TAZ domain-containing protein 2 170 240 - -
Gabi3865g00015 376 Coils Coil 225 245 - -
Gabi3865g00015 376 SUPERFAMILY POZ domain 47 164 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00015 Gabi-Chr3865 220234 224445 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gabi3865g00015 BTB 6e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00015 - - lja:Lj2g3v1968190.1 605.134