Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00014 ATGAAAGCTCGTTGCTTAAGCTTCTATATCATCATTATCTCACTGTCCCTGTTCATTCCAGTCAACACTGCAAAAGGGGTAAACACCACCACTGCAACTGCAAATGAATCTGACAATAGAAGAATTCTTCACGAACCATTGTTTCCGGCGAGTTCTGCTCCACCGCCAGCAGGCACGGAGTCACAACCTTCGCCGCCTCCGCCGCCGCCTCTGGAGACTCCGCCATCTCCGGACACCGACATTCCTTTCTTCCACGAGTATCCGGCGGGGCCACCCCAAGATCAGAACCAAGCAGCACCTTCAACTTCAAACAGCACAATAGCGAACCCAACGGCGACGCAGCCAGCGAAGGGGACAAAGAAGGTTGCAATTGCGATCTCCGTTGGGATTGTGACGCTTGGGATGCTATCGGGACTCGCTTTCTTCTTGTACAAGCACAGGGCAAAACACCCCGTTGAGACCCAGAAACTCATGGGTGGGAATCCACAGAGAAACTCTGAGGATTCAACGGCGCCACCGTCGAGCTTCCTCTACATTGGGACCGTTGAACCAATGCGAACGACATCAGTGACAGTGAATGAGCAAAGAGAACCCAATGGAGGGGCAAAAGGGTCACCTTATCACAAACTCAATTCCATTAAGCTATCAGATCGGTACCGTCCAAGTCCTGAGTTGCAACCATTGCCTCCTCTGAGGAAACTACCCGACGGTAACTTCCCGCCGGCGGTGTCGTCGTCGTCCTCCTCTTCCGACGAGGAAAGCCACGAGACCGCGTTTCACTCGCCGCAGAACTCCTCGCTCAGTCACGAGGATGGGTTTTACACGCCGGTTTCGCGTCAGAGTTCTCTTGTTAACGGTAGCCCCGCCGCGGCACCGGCCCGGAGAGAGACTCATTCCACTCCTCCGGTTCCGTTCTCGAAGAGGACTTCGCCAAAGTCTCGGCTTTCGACTTCCTCGCCGGATATAAGACACGTCATCATGCCATCTATAAAGCCGGCTCCGGCGCCGCCGCCTCCGCCGTCGAGAAAACCAAAGTTCTCAGCGCCTCCCCCAGCTCCGAATTTGACTCATCTTCAGTCAACGACCAACACAGCGTTACCCGTATCCAGGACTTCACTTAATCCCCCTCCTTCTGCTCCTCCTCCACCGCCGCCGCCGCCACCACCTCCTCCACAGCCACGAAAAACACCAGTAAAATCAGGGTCACCGGCGGTTAGCGTTTCCTCTTCTTCTGCATCTATAAAGCACCAGTCTTGGTGTCCAAGTGAAGGAGCTGGTTCTGGTGGAAGTGTAACAAAAGCTTCAGAGAATGTTGATAAAATTGTGAGGTCTTCTGAGAGTGTAGAAGCCAATGACATGGATGGGGCGAAACCCAAGTTAAAAGCTTTGCATTGGGATAAAGTCCGTGCGACCTCAGACCGAGCTACAGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAATTAAATGAGGACATGATGGAGTCCCTTTTTGGTTGCAAAGCCACGAATTCTGCCCCTAAAGAACCTCCTAGAAAATCAGTTGTTCCCTCCACTGATCAGGAGAATAGGGTGTTAGACCCCAAGAAGTCCCAAAACATAGCTATACTACTGAGGGCACTGAATGTGACAAGAGATGAGGTGTCCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACCTTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTTAAAAACTTTGATGGTGACCTCTCAAAACTTGGATCTGCAGAAAGATTTCTTAAAGCTGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTGGAAGCTATGCTGTACAGAGCCAACTTTGATGCAGAAGTTAATTACCTTAGGAAGTCTTTTCAAGCCCTGGAGGCAGCAAGTGAGGAATTAAGGAACAGCAGGCTATTCCTCAAACTCCTCGAAGCTGTTCTCCAGACAGGAAACAGAATGAATGTTGGCACTAATCGAGGTGATGCTAAAGCTTTCAAACTGGACACACTCCTAAAACTTGTAGATATAAAGGGAAAAGATGGAAAGACCACATTACTCCACTTTGTGGTTCAAGAGATCATTAGATCAGAAGGTGCAGGAGCTGAATCTGCACATGAGAATGCTCAGAACAAAACGGATTCCAAATTTAATGAGGATGAATTTAAGAAGCAAGGATTGCATGTTGTGGCTGGGCTCGGTAGGGACCTTAATAATGTAAAAAAAGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTATGTTTCAAAGCTTGAAACGGGGCTTGATAAAGTTCTATTGGTTTTGCAATATGAGAAGCCAGATATGCAAGGCAATTTCTTTAAATCAACAAAGCTATTTTTGAAATATGCTGAAGATGAAATTACAAGGATTAAGGCCGAGGAGAAAAAGGCCTTATTCCTTGTGAAAGAAGCTACGGAATACTTTCATGGGGATGCAGCAAAGGAAGAAGCCCACCCTTTCAGAATTTTCATGATTGTAAGAGACTTTCTGAATATTTTGGATCTAGTGTGCAAAGAAGTGGGCAGGATGCATGATAGAATTGTTGGTGGCTCTGGAAGATCCTTCAGAATAGCTGCAAATGCATCATTACCTGTTCTCAACAGGTACAATGCAAGACAAGATAGAAGCTCAGATGAGGAAAGTTCATCCCCCTAG 2697 0.4787 MKARCLSFYIIIISLSLFIPVNTAKGVNTTTATANESDNRRILHEPLFPASSAPPPAGTESQPSPPPPPPLETPPSPDTDIPFFHEYPAGPPQDQNQAAPSTSNSTIANPTATQPAKGTKKVAIAISVGIVTLGMLSGLAFFLYKHRAKHPVETQKLMGGNPQRNSEDSTAPPSSFLYIGTVEPMRTTSVTVNEQREPNGGAKGSPYHKLNSIKLSDRYRPSPELQPLPPLRKLPDGNFPPAVSSSSSSSDEESHETAFHSPQNSSLSHEDGFYTPVSRQSSLVNGSPAAAPARRETHSTPPVPFSKRTSPKSRLSTSSPDIRHVIMPSIKPAPAPPPPPSRKPKFSAPPPAPNLTHLQSTTNTALPVSRTSLNPPPSAPPPPPPPPPPPPQPRKTPVKSGSPAVSVSSSSASIKHQSWCPSEGAGSGGSVTKASENVDKIVRSSESVEANDMDGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCKATNSAPKEPPRKSVVPSTDQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNFDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQALEAASEELRNSRLFLKLLEAVLQTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGKDGKTTLLHFVVQEIIRSEGAGAESAHENAQNKTDSKFNEDEFKKQGLHVVAGLGRDLNNVKKAAGMDSDVLSSYVSKLETGLDKVLLVLQYEKPDMQGNFFKSTKLFLKYAEDEITRIKAEEKKALFLVKEATEYFHGDAAKEEAHPFRIFMIVRDFLNILDLVCKEVGRMHDRIVGGSGRSFRIAANASLPVLNRYNARQDRSSDEESSSP 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 94 116 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 154 176 - -
Gabi3865g00014 898 PANTHER FORMIN-RELATED 16 892 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi3865g00014 898 Pfam Formin Homology 2 Domain 455 847 IPR015425 -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 373 397 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 49 77 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 46 119 - -
Gabi3865g00014 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 381 857 - -
Gabi3865g00014 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 450 873 IPR015425 -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 353 372 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 217 438 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 259 287 - -
Gabi3865g00014 898 Gene3D Formin, FH2 domain 445 858 IPR042201 -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 399 438 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 158 176 - -
Gabi3865g00014 898 SMART it6_source 450 862 IPR015425 -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 302 323 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 501 522 - -
Gabi3865g00014 898 MobiDBLite consensus disorder prediction 330 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00014 Gabi-Chr3865 209197 214550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3865g00014 39 888 FH2 protein (formin) Gene Family AT5G67470 58.057 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00014 - - gmx:100798670 1157.9