Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00012 ATGAGTGAGGAGGAGTTACCTACGGTGGTTGTGAGAGAGTTCGACCCAATTAAAGACAGGAAGAGAGTAGAAGCCGTTGAAAGGATATGTGAGGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACCGACATGCTCGGTGACCCAATTTGCAGGGTCCGCCATTCACCTGCTTTTCTCATGCTGGTGGCGGAGATGGGTGAAGAGATAGTGGGAATGATAAGGGGATGCATCAAAACTGTCACATGCGGAAAGAAGCTCTCTAGAAATGGAAAGAACATAAACACTGACATCTTACAAGCTACTAATGCCAAACACGTCCCTGTATACACCAAACTCGCCTACATATTAGGCCTTCGCGTTTCTCCTGATCAACGGAGAATGGGAATAGGGTTGAAGCTAGTACAGAGATTGGAGGCATGGTTCAGTGATAATGGCGCTGAATACTCTTACATGGCAACGGAAAACGACAATTTAGCATCCGTTAAGCTCTTCACCGACAAATGCGGGTACTCGAAATTTCGTACACCGTCCATCCTTGTCAACCCCGTTTTCGCCCATCGAGTCAGGGTGTCTCCGAAGGCCACCATCATTCCCCTCACCCCTTCCGACGCCGAGACACTCTACCGCCGCCGTTTCGCCACCACGGAGTTTTTCCCCCGCGACATTGACTCAATCCTTAACAACAAGCTCAGCCTGGGCACCTTCCTCGCCGTCCCACGTGGGTCCTACAGTGCTGAATCATGGCCCGGCCCTGATCGATTCCTGTTGGACCCACCACAGTCGTGGGCCATGCTCAGCGTCTGGAACTCCAAGGAGGTCTTCATGCTCGAGGTCCGTGGCGCGTCGCGCGTGAAGCGCACTCTCGCCAAGACGAGTCGTGTGGTGGATCGGGCCCTGCCGTGGCTGCGGTTGCCGTCGATTCCGGATTTGTTCAGGCCGTTCGGTTTCCACTTCATGTACGGGTTAGGAGGTGAAGGTCCGGAGGCGGTGAAGATGGTGAAAGCCCTGTGTGAATTCGTGCATAACCTTGCTAAGGAAAGTGGTTGCGGGGTGGTGGCCACCGAGGTGTCCACCGGCGAACCCTTAAGGTTTGGGATACCGCACTGGAAGATGCTATCTTGTGATGAGGATTTATGGTGCATCAAGAGGCTCGGCGAAGATTACAGCGATGGCTCCGTCGGTGACTGGACCAAATCTCCACCCGGAATCTCCATTTTTGTTGACCCCAGAGAGGTCTAA 1239 0.5335 MSEEELPTVVVREFDPIKDRKRVEAVERICEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEMGEEIVGMIRGCIKTVTCGKKLSRNGKNINTDILQATNAKHVPVYTKLAYILGLRVSPDQRRMGIGLKLVQRLEAWFSDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHRVRVSPKATIIPLTPSDAETLYRRRFATTEFFPRDIDSILNNKLSLGTFLAVPRGSYSAESWPGPDRFLLDPPQSWAMLSVWNSKEVFMLEVRGASRVKRTLAKTSRVVDRALPWLRLPSIPDLFRPFGFHFMYGLGGEGPEAVKMVKALCEFVHNLAKESGCGVVATEVSTGEPLRFGIPHWKMLSCDEDLWCIKRLGEDYSDGSVGDWTKSPPGISIFVDPREV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00012 412 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 52 172 IPR016181 -
Gabi3865g00012 412 CDD NAT_SF 60 148 - -
Gabi3865g00012 412 Gene3D - 40 176 - -
Gabi3865g00012 412 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 412 - -
Gabi3865g00012 412 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 189 IPR000182 GO:0016747
Gabi3865g00012 412 Pfam Acetyltransferase (GNAT) family 54 170 IPR000182 GO:0016747
Gabi3865g00012 412 FunFam Probable N-acetyltransferase HLS1-like 18 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00012 Gabi-Chr3865 170284 171799 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi3865g00012 Acetyltransf_1 2.6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00012 - - gmx:100800613 708.753