Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00008 ATGAGTTGTAACGGGTGCCGAGTCCTTCGAAAGGGTTGCAGTGAGTCCTGTATTCTGAGACCGTGTCTACAGTGGATTGAAACCCCTGAAGCCCAAGGCCATGCCACTGTTTTCGTAGCCAAATTCTTTGGCCGTGCAGACCTCATGTCCTTCATTTCAAACGTCCCTGAACCCCAAAGACCTGCTCTGTTTCAATCTCTGTTGTTCGAAGCTTGTGGACGAACGGTGAACCCCGTGAACGGCGCCGTGGGGCTTCTGTGGACAGGAAACTGGCACGTTTGTCAGGCGGCTGTTGAGACGGTGCTCCGTGGCGGCACCCTGAGGCCCATGCCGGATCTTCTTGGCCTAGACGCGCCCTCTCCCATCGGGGACGACGCATCCGAAGGGGAAGTCACTTGCACCGACATGTGGAGGGTCCGAGATCCGAACCCGGTTTTGCGGTTCTCGAGCTCGCAGTCTAATAAGGTCGCTTCCGGCGGTAAACGCAAGCGATCGAACGAAATCACCAAGTTTCAGACGACGACCGATCTCAATCTCCGGTTGACGCCGAGTTTTCTGCATAACGTCTCCACCTACGACTGCCGACACGAAACTCGCCGACCGGGCACACCGTCGATGAATTCGGAGGAATCCGTGACGACGACGTGCTTGGAAAGTGGGATCGGAGAACACTACGCTCACGGCGGAGACCGGAAAGTGCTTAACCTTTTCGTTTGA 717 0.5607 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRADLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPDLLGLDAPSPIGDDASEGEVTCTDMWRVRDPNPVLRFSSSQSNKVASGGKRKRSNEITKFQTTTDLNLRLTPSFLHNVSTYDCRHETRRPGTPSMNSEESVTTTCLESGIGEHYAHGGDRKVLNLFV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00008 238 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Gabi3865g00008 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 222 - -
Gabi3865g00008 238 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00008 Gabi-Chr3865 116821 118297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3865g00008 1 238 AS2 family AT3G49940 56.420 1.51e-84 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3865g00008 LOB 6.6e-26 No_clan