Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3865g00007 ATGACGCAATTCACACCAACACTACCACCTTTGCACCAAACCACACACTTTTCAAACACTAGCATGAACAAAAATCAACTTCCTAGGACTAGGCCCTGGCCTGGGTTCCCCACATCTAAGGCCCTAGGTAACTTCGGCGACGCCAATTGTATGGAACAGTTACTTGTTCACTGTGCCAACGCTATAGAAATCAACGATGTAACACTTGCCCAACAGATCCTTTGGGTCCTCAACAACATAGCACCCCCTGACGGTGACTGCAATCAGCGCCTAGCTGGTAGCTTCCTTCGCGCTCTCACAGCCCGCGCTGCCAAAACCGGAAGTTGCAAAATGCTTGCCGCCGTGGCAGACTCCGCTCATAGCAATCTCGCCATAGACACTCACAAATTCTCTGTCATCGAGTTAGCCAACTTCGTTGACTTGACTCCTTGGCATCGCTTTGGTTTCACAGCAGCTAATGCTTCCATTCTAGAAGCTACCGAAGGATTCTCAGTCATTCATATAGTGGACTTAAGTTTGACACATTGCATGCAAATTCCCACGCTCATTGATGCCATTGCTAGCAGACAACAAGTTCCACCTCTAATCAAGCTCACAGTTGCTGGTGCTACCTGCAGAGACATTCCACCTATGCTTGACCTCTCCTATGAAGAATTGGGTACCAAGTTGGTTAATTTCGCTAGGTCAAAAAACGTGATTATGGAATTCACAGTTGTTTCTTCAAGTTATGAAGATGGGTTCGCTGCTTTGATCGAACACCTGCGGGTGCAACATTTAGTGTACGCGGCAGAAGGTCGTCCAACTGAAGCTTTGGTCATAAACTGTCACATGATGCTTCATTACATTCCTGACGAAACTATATCAGAATTTACAGATGCATTTTCAAACTCTTATGTTTGTGATTCTTCTTCTGCTGCTACTACTTCGTCCTTGCGATCAATGTTCCTCAAAGCCTTGCGGACTTTAGACCCAACCATTGTAGTTTTGGTAGATGAAGATGCAGATTTAACATCCAATAATTTGGTTAGCAGATTAAGGTCTGCGTTTAATTATCTGTGGATACCATACGACACGGTGGACACGTTCCTTCCACGAGGCAGTAAACAAAGGCAGTGGTATGAAGCGGATATTTGTTGGAAGATTGAGAATGTGATAGCACATGAAGGGCTTCAGAGGGTTGAGCGGGTTGAGCCAAAAAGCAGGTGGGAACAACGAATGAGAAATGCTAACTTTCATGGGATCAGTTTCAGTGAGGATTCAGTTTCGGAGGTGAAAGCCATGCTCGATGAACATGCAGCTGGATGGGGATTAAAGAAGGAGGATGAGCATCTTGTGCTCACATGGAAAGGACATAATGTTATCTTTGCCTCTGCTTGGTTGCCTGCTTGA 1389 0.4557 MTQFTPTLPPLHQTTHFSNTSMNKNQLPRTRPWPGFPTSKALGNFGDANCMEQLLVHCANAIEINDVTLAQQILWVLNNIAPPDGDCNQRLAGSFLRALTARAAKTGSCKMLAAVADSAHSNLAIDTHKFSVIELANFVDLTPWHRFGFTAANASILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRQQVPPLIKLTVAGATCRDIPPMLDLSYEELGTKLVNFARSKNVIMEFTVVSSSYEDGFAALIEHLRVQHLVYAAEGRPTEALVINCHMMLHYIPDETISEFTDAFSNSYVCDSSSAATTSSLRSMFLKALRTLDPTIVVLVDEDADLTSNNLVSRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGLQRVERVEPKSRWEQRMRNANFHGISFSEDSVSEVKAMLDEHAAGWGLKKEDEHLVLTWKGHNVIFASAWLPA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3865g00007 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 50 449 IPR005202 -
Gabi3865g00007 462 Pfam GRAS domain family 51 459 IPR005202 -
Gabi3865g00007 462 MobiDBLite consensus disorder prediction 1 28 - -
Gabi3865g00007 462 MobiDBLite consensus disorder prediction 1 33 - -
Gabi3865g00007 462 ProSiteProfiles GRAS family profile. 42 460 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3865g00007 Gabi-Chr3865 75309 76697 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3865g00007 36 461 GRAS Transcription Factor Family AT3G49950 58.140 1.82e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3865g00007 GRAS 3.2e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3865g00007 - - gmx:100808898 733.791