Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3856g00002 ATGGGTCTTGAAACAATTTACCCTTTGGCCCTTTTTTCCATTATCCTCTACATCATTGTGACACAAAAACTAAGGAGGAACCTCAAGAAAAATGACTCAATTCAAAATATACCACCAGGGCCATGGAAGCTACCTATCGTAGGAAATATACCCCATCTTGTTGGGTCTGCACCACACAGAAAATTAAGAGAATTGGCGGAAAAGTTTGGACCCTTGATGCATCTTCAACTGGGTGAGGTCTTCTTCATTGTTGTTTCCTCACCAGAGTATGCTAGGGAGGTCATGAAAACCCATGATGTTATCTTTGCATCAAGGCCTCCTTCTCTAACTTCACAGATAGTGTTCTATAATTCCACAGATATAGCATTTTCACCTTATGGTGATTACTGGAGGCAGCTTCGAAAGATTTGTACCATGGAGCTTTTAAGTATAAAACGTGTCCAATCTCATTGGCCAATCAGAGAGGAAGAGATTACTAATCTCATCAAACGGATTGGTTCAGAAGAAGGATCAGTCATCAATCTTACTCAAGCAGTTATATCACTGTTGTATACAATAACTTCAAGGGCTGCATTTGGAAAGAAATACATGGAGCAAGAAGAGTTCATATCAGTGGTAAGAGAGGTTTTAAAGCTAGCTGGTGGTTTCTACATTGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCTGGGATGAGGCCTTTGCTTGAGAAGTTACACCAAAAAGTAGACAGGATATTAGAGAATATCATCAATGACCACAGAGAGGCAAAGTCAAGAACTAAAGAAGGTCTAGTTGAAGCAGAGGAGGAAGATCTCATTGATGTTCTCTTGAAATTTGAGGATAGGAGCAGTGACAGGGATTTTCTCTTAACTAATGAAAATATCAAGGCTATAATCTTTGATATCTTCACAGGTGGAAGTGACACTGCTGCAACTACCATTAACTGGGCAATGGCTGAGATGATAAAGGATCAAAGAGTCTTGAAGAAAGCACAATCTGAAGTGAGAGAGATATTTGAAAGGAGAGGAAGGGTTGACGAAAGTTGTATTGAAGAGCTCAAATACTTGAAAGCAGTCATCAAAGAGGTTCTGAGATTACACCCTCCAGGTCCACTTTTGATTCCCAGGGAATGTGGACAAGCTTGTGAGATTAAAGGGTATCACATACCTGTCAAAAGTAGGGTCATAGTGAATGCTTGGGCAATTGGAAGAGATCCAAATTATTGGACTGAACCAGAGAACTTTTATCCTGAGAGGTTTAGTGATAATCCTATTGACTACAAAGGAACTAGTTTTGAGTACATCCCATTTGGTGCTGGAAGGAGAATATGCCCAGGCATGAACTTTGCTGTTGCAAATGTTGAGTTGGTTCTTGCAATGTTATTGTATAACTTTGATTGGAGACTTCCCAATGGAATGAAAAGTGAGGATTTGGACATGGCTGAGGTATTTGGAGCGTCTGTTATTAGAAAAGAAGACCTGTACTTGCTTCCCATCGCTTCTCCAACCACGCTTCGCTCGCAGCGCGAGAACACTGCCTTCCTCGCATCGTCTTGCACTAACAACACGAACCATGGCGCTCGTGGATCAAATTGCCCACATGTGGCGACCACTCTGGAAGCTGTGCAAAGGGAGTTGACCATTAGTCGCCAGGCTAATGAAACGTTGTTGAAGACTAATGAGGATGCGCAGAATGCTATGACCGCGATGATGAATGAATTGAGGACACTGAGGAGTGCTAGACATGATAACAGACCACCTACTCCTCCTCCCCACACTGCCACACCTACTCCACATACTCTCCATGTAGATGGTGGAGCGGGTAACAATGAAGAAGGGGCTAGTCACCATGATAATGGCTCTAGTCATCATATTATGGTTCATCAACCGCATGTGCAACATGTTGGTGGGCCAGACGCGGATGAAAGGCGATTGACTGCTTTTCGGAAACACAAACTTCCATCCTTCACTGGAGGCTATGATCTGGTGATGAGATGCCCTGATGCATTGAAGTTGGTTTACTCAGTGTACATGCTTGAAGGCGAGGTCGAGGATTGGTGGACGAACACCGTGCAACCGTTGGAGGCTGAAGGCCAGGAAATCACCTCGCAGTTGTTTGAGACTTTGTTCTTGAATAACTACTATCCCAGGGAGGCTAGGGAAAGGAAGCAAAATGAGTATAATGATTTGAAGCAAGGATCGATGACCATTGACCAATATTTTGCCAAGTTCAATGAATTGGTGAAGTATGCTCACTACGGGAGAGCCCTACCTACTTCAGCCGAGATGACCTCCAAGTTTCAATTGGGTCTAAATGAGAAAATGTCTCGGAAAATGTCTAATTGCGATATCCGTGAGTTTAGTAAGTTTGTGAACCAATGCCGGAAAGTAGAAGAAGTTTATAGTGTGACTAAGACCAAGAAGCCTTCAAAGGCACAAGCATCTAGTGCAAGTAGAGCAACTGGCTCAAATTCTTGGAAAAACAAGAAAATGAAAAGTAAGAAGCTGAGTAAACCAAAGGCAAAGGTGATGGTGCTTACCACCAAGGCTTGGAACAGAGACAATGGTGCTCTTGGAGCTCACCACTCAGCCCCAATGTTCAGACTACAAAGGTCCACGTAA 2631 0.4303 MGLETIYPLALFSIILYIIVTQKLRRNLKKNDSIQNIPPGPWKLPIVGNIPHLVGSAPHRKLRELAEKFGPLMHLQLGEVFFIVVSSPEYAREVMKTHDVIFASRPPSLTSQIVFYNSTDIAFSPYGDYWRQLRKICTMELLSIKRVQSHWPIREEEITNLIKRIGSEEGSVINLTQAVISLLYTITSRAAFGKKYMEQEEFISVVREVLKLAGGFYIGDLFPSAKWLQNLSGMRPLLEKLHQKVDRILENIINDHREAKSRTKEGLVEAEEEDLIDVLLKFEDRSSDRDFLLTNENIKAIIFDIFTGGSDTAATTINWAMAEMIKDQRVLKKAQSEVREIFERRGRVDESCIEELKYLKAVIKEVLRLHPPGPLLIPRECGQACEIKGYHIPVKSRVIVNAWAIGRDPNYWTEPENFYPERFSDNPIDYKGTSFEYIPFGAGRRICPGMNFAVANVELVLAMLLYNFDWRLPNGMKSEDLDMAEVFGASVIRKEDLYLLPIASPTTLRSQRENTAFLASSCTNNTNHGARGSNCPHVATTLEAVQRELTISRQANETLLKTNEDAQNAMTAMMNELRTLRSARHDNRPPTPPPHTATPTPHTLHVDGGAGNNEEGASHHDNGSSHHIMVHQPHVQHVGGPDADERRLTAFRKHKLPSFTGGYDLVMRCPDALKLVYSVYMLEGEVEDWWTNTVQPLEAEGQEITSQLFETLFLNNYYPREARERKQNEYNDLKQGSMTIDQYFAKFNELVKYAHYGRALPTSAEMTSKFQLGLNEKMSRKMSNCDIREFSKFVNQCRKVEEVYSVTKTKKPSKAQASSASRATGSNSWKNKKMKSKKLSKPKAKVMVLTTKAWNRDNGALGAHHSAPMFRLQRST 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3856g00002 876 MobiDBLite consensus disorder prediction 809 830 - -
Gabi3856g00002 876 MobiDBLite consensus disorder prediction 583 626 - -
Gabi3856g00002 876 Coils Coil 556 583 - -
Gabi3856g00002 876 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 Pfam Retrotransposon gag protein 680 776 IPR005162 -
Gabi3856g00002 876 CDD CYP71-like 68 497 - -
Gabi3856g00002 876 Gene3D Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 FunFam Cytochrome P450 71D8 30 501 - -
Gabi3856g00002 876 PANTHER OS08G0105600 PROTEIN 61 502 - -
Gabi3856g00002 876 MobiDBLite consensus disorder prediction 808 842 - -
Gabi3856g00002 876 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00002 876 Coils Coil 253 273 - -
Gabi3856g00002 876 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Gabi3856g00002 876 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3856g00002 Gabi-Chr3856 44201 50851 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3856g00002 3 501 Cytochrome P450 AT3G26300 41.797 1.94e-129 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3856g00002 - - gmx:100801936 698.738