Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3856g00001 ATGTTTTCCTTCTTAATTATGGAGTTGGGTCTCCACAATATTCCCTTACCTGCAATCTTGTCCTTCTTTCTCTTCTTGTTCATGGTGTTTAGCATAGTTTGGAGATCAAAAACCAAGCCTTCAAACTCCAAGTTACCACCAGGACCCGCAAAATTGCCTCTTATAGGGAACATGCACCAGCTTGGTGCAATGCCTCATCAAGGCCTAGCAAAATTAGCAGAGAAATATGGACCTCTGATGCATATGAAACTTGGTGGACTTTCCACCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTTATGAAGACACATGACATCATCTTTGCAAATAGGCCTCATCTTCTTGCTGCAGATGTTGTAACTTATGGTTCAAAGAGCATGAGCTTTTCCCCTTATGGAAGTTATTGGAGGCAGATGAGAAAGATTTGCACTTTGGAGCTACTAACTACAAAGCGTGTTGAATCATTTCGATCAATTAGGGAAGAGGAGGCATCAAAACTTATCAAAGATATAAGTTTGAGTGAAGGGTCATCTTTCAATCTCAGTAAGGCGATCAATTCATTGACATGTAACTTAACATCAAGAGTAGCCTTAGGAGGCACAATCAAGGACCAAGAAGCATTCGTAGCTGCTATGAAAGATGTTTCAAAAGTAATGACTGGTTTCTCTATAGCTGACTTGTATCCTTCCTTTGAAGTGCTTCAATTTTTGACAGGAATAAGGTCCAAAGCTGAGAAGCTTCATCATGAAATAGATAGGATACTTGAGAAAATTGTAAGAGATCACCAAGACACAAGTTCAGAAACAAAGCCAATCAATGCAAAGGGAGGGGAAGATCTTGTTGAAGTCCTGCTAAAGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTGTCAGACAGCATTATCAAAGCAACTATGTTTGATGTCTTCGCTGGTGGAACCAGTACAACAGCGAGAACCTTAGATTGGGCAATGTCAGAACTTGTAAAAAATCCAAGGATGATGGAAAGAGCACAAGCTGAAATAAGAAGGGTCTTTGATGGTAAAGGGCGTGTAGATGAAGCTAAACTCCATGAACTTAAATACTTAAAGTCAGTTATCAAAGAAACCTTGCGTCTACATATTCCTCTTCCATTATTACTACCAAGGGAATGCAGTGAGAGATGTGAAATCAATGGTTATGAGATACCACCTAAGAGTAAGGTCATTATTAATGCTTGGGCAATTGCAAGGGATCCAAACTACTGGGTTGAAGCTGAGAAGTTCTATCCAGAAAGGTTCCTTGATAGCACAGTTGATTACAAAGGTACAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGCTCTATATTTGGCGTTGCTACTGTTGAACTCTTACTAGCAAATTTGCTTTTCCATTTTGATTGGAAGATGCCTGATGGGAATAAGCCTGAAGAACTTGACATGACTGAATCATTTGGTGTGTCTGTAAGAAAAAAACATGAGTTGTACCTGATTCCTTGTATTTATCACTCATCTGTTAATTAA 1545 0.3974 MFSFLIMELGLHNIPLPAILSFFLFLFMVFSIVWRSKTKPSNSKLPPGPAKLPLIGNMHQLGAMPHQGLAKLAEKYGPLMHMKLGGLSTIVVSSPEMAKEVMKTHDIIFANRPHLLAADVVTYGSKSMSFSPYGSYWRQMRKICTLELLTTKRVESFRSIREEEASKLIKDISLSEGSSFNLSKAINSLTCNLTSRVALGGTIKDQEAFVAAMKDVSKVMTGFSIADLYPSFEVLQFLTGIRSKAEKLHHEIDRILEKIVRDHQDTSSETKPINAKGGEDLVEVLLKLQKQNNLEHPLSDSIIKATMFDVFAGGTSTTARTLDWAMSELVKNPRMMERAQAEIRRVFDGKGRVDEAKLHELKYLKSVIKETLRLHIPLPLLLPRECSERCEINGYEIPPKSKVIINAWAIARDPNYWVEAEKFYPERFLDSTVDYKGTDFQFIPFGAGRRMCPGSIFGVATVELLLANLLFHFDWKMPDGNKPEELDMTESFGVSVRKKHELYLIPCIYHSSVN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3856g00001 514 SUPERFAMILY Cytochrome P450 46 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 FunFam Cytochrome P450 71D8 38 506 - -
Gabi3856g00001 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Gabi3856g00001 514 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 Gene3D Cytochrome P450 38 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 PANTHER OS08G0105600 PROTEIN 70 509 - -
Gabi3856g00001 514 Pfam Cytochrome P450 46 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3856g00001 514 CDD CYP71-like 75 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3856g00001 Gabi-Chr3856 24806 26963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3856g00001 23 509 Cytochrome P450 AT3G26300 40.726 9.42e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3856g00001 - - gmx:100818000 785.023