Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3843g00004 ATGAACATCATCAAAAGCAAAGAAGAGCTTGCTCTACTCTTTGCATTTTTCTTCATAACTTGCGGGTATGCACAAGACACCCTTGTGCCAGCAATCATAACATTTGGTGACTCTGTTGTGGATGTTGGGAATAATGACTATCTTCCCACTCTTTTCAAAGCTGATTACCCTCCTTATGGTAGAGACTTTGTTAACCACCAACCTACTGGGAGGTTCTGCAATGGGAAACTAGCTACTGATATTACCGCTGAAACACTGGGTTTTAAAACTTTTGCACCTGCATATCTTAGCCCTCAGGCATCAGGGAAGAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTATTTTGAGTCATGCTATCCCATTGTCCCAACAGTTAGATTATTACAAGGAATATCAAAGCAAGCTGACTCAGGTAGCTGGCAGTAAAAAAGCAGCCTCAATTATCAAGGATGCATTGTACTTATTGAGTGCTGGTAGCAGTGACTTTGTGCAAAATTATTATGTCAATCCTTTTATCAACAAAGCTGTCACTCCTGATCAGTATTCCTCGTACCTAGTGGATGCATTCTCAAGCTTTGTTAAGGACTTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCCCAAGGATTTAACAAGAAGATCAACTCAGCTGCAACAAATCTTCAAAAGCAACTTCCTGGTCTTAAGATTGTGGTCTTTGATATTTTCAAGCCTCTCTATGATCTTGTTCAATCCCCTTCAAAATTTGGTTTTGTGGAGGCAAGGAGAGGTTGCTGTGGTACAGGAACTGTTGAGACAACATCCTTGTTGTGCAATCCAAAATCACCAGGAACTTGTTCCAATGCAACACAGTATGTGTTTTGGGACAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCTGATTCATTACTTGTACAAGGCATAGGTCTTATCTCATAA 1065 0.415 MNIIKSKEELALLFAFFFITCGYAQDTLVPAIITFGDSVVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKTFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILSHAIPLSQQLDYYKEYQSKLTQVAGSKKAASIIKDALYLLSAGSSDFVQNYYVNPFINKAVTPDQYSSYLVDAFSSFVKDLYGLGARKIGVTSLPPLGCLPAARTLFGFHENGCVSRINTDAQGFNKKINSAATNLQKQLPGLKIVVFDIFKPLYDLVQSPSKFGFVEARRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADSLLVQGIGLIS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3843g00004 354 Gene3D SGNH hydrolase 21 348 IPR036514 -
Gabi3843g00004 354 FunFam GDSL esterase/lipase APG 21 350 - -
Gabi3843g00004 354 CDD SGNH_plant_lipase_like 30 346 IPR035669 -
Gabi3843g00004 354 PANTHER GDSL ESTERASE/LIPASE EXL3 18 345 - -
Gabi3843g00004 354 Pfam GDSL-like Lipase/Acylhydrolase 32 344 IPR001087 GO:0016788
Gabi3843g00004 354 SUPERFAMILY SGNH hydrolase 149 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3843g00004 Gabi-Chr3843 16879 18955 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3843g00004 6 346 Pollen Coat Proteome AT1G75910 34.493 1.36e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3843g00004 - - gmx:100793645 627.476