Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3842g00050 ATGGCGGTCAAACCTACCAAGGCCGAGAAGAAGGTCACGTACGATGCGAAGCTGTGCAAGCTCTTGGACGAGTATTCTCAGATCCTTGTGCGCTCCGTTAGGATTCATGCTGAGAACTCAGGCAACAATGCCTATCTCAACCTTATCCCTCTTCTTGTCGGCAATGTGGGGTTGATTTTCACAAAAGGTGACTTGAAGGAGATTAGCGAAGACCTTGCTAAGTACAAGGTTGGAGCTCCTGCTCGCGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTTCCTCCTGGCAACACTGGGCTCGATCCCTCTCAGACCTCTTTCTTCCAGGTGCTCAACATTCCAACCAAGATTAACAAGGGTACTGTGGAAATCATTTGCCCTGTGGAACTCATCAAGAAGGGAGACAAGGTCGGCTCTTCTGAAGCTGCATTGCTTGCCAAGCTAGGCATAAGGCCCTTCTCATATGGTCTTGTGGTGCTTTCGGTTTATGATAATGGTTCAGTGTTTAGCCCTGAGGTTCTTGATCTTAGTGAGGATGACCTCGTTGAAAAGTTTGGTATTGGTGTCTCAATGGTTACTTCACTTTCGTTGGCGATCTCGTACGCCACACTTGCAGCTGCACCGCATATGTTTGTCAATGCATATAAGAACGTTCTTGGTGTAGCAGTTGAGACAGAATATTCTTTCCCTCGGGCAGACAAGGTTAAGGAGCTCTTGCAGGACCCAAGTAAATTTGCTGTAGCTGCTTTTGCCGCAACTGCTGCAAATTCTGGTGCTTCCCAAGCTGCTGCTGCCGAGGAAGAGGAAAAGAAAGAAGAGCCAGTCGAAGAATCCGACAATGACATGGGTTTCAGTTTGTTTGACTAA 867 0.4752 MAVKPTKAEKKVTYDAKLCKLLDEYSQILVRSVRIHAENSGNNAYLNLIPLLVGNVGLIFTKGDLKEISEDLAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIICPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLSEDDLVEKFGIGVSMVTSLSLAISYATLAAAPHMFVNAYKNVLGVAVETEYSFPRADKVKELLQDPSKFAVAAFAATAANSGASQAAAAEEEEKKEEPVEESDNDMGFSLFD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3842g00050 288 MobiDBLite consensus disorder prediction 259 288 - -
Gabi3842g00050 288 Pfam Insertion domain in 60S ribosomal protein L10P 81 150 IPR040637 -
Gabi3842g00050 288 Gene3D - 77 155 IPR043164 -
Gabi3842g00050 288 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 29 270 - -
Gabi3842g00050 288 Pfam 60s Acidic ribosomal protein 203 287 - -
Gabi3842g00050 288 PIRSF L10E 29 288 IPR030670 GO:0042254
Gabi3842g00050 288 PIRSF L10E 1 35 IPR030670 GO:0042254
Gabi3842g00050 288 Gene3D - 28 179 IPR043141 -
Gabi3842g00050 288 FunFam 60S acidic ribosomal protein P0 80 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3842g00050 Gabi-Chr3842 593443 599646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3842g00050 3 245 Cytoplasmic Ribosomal Protein Gene Family AT3G09200 84.362 4.16e-152 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3842g00050 K02941 - jre:108991896 449.899