Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3842g00033 ATGTGGAGCCGAGGTTTCAGTGTTTTGATCAAGGGTTGCCTTTTGTTGGTGTTAATATCTGTAATTTCTGGTCTGGAACCCGAACTTGGATCGACCCGCGTTGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTTTCCAAGTGTTGCACCCAAAACTGTTGACCACATTTTTAAGCTTGTGCGACTTGGAGGCTATAACACTAATCATTTCTTTCGGGTGGATAAGGGATTTGTAGCCCAAGTAGCAGATGTTATAAATGGAAGATCTGCTCCCATGAATGAAGAACAGAAAAGAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGTGAAGTCAAACATGTTCGGGGTATTCTTTCTATGGGAAGGTATGATGATCCAGACAGCGGTTCATCCTCATTTTCAATACTACTTGGAAATGCTCCTCATCTAGATGGCAAGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGAAACGTTGACAAAGCTAGAGCAACTACCCACCCGTAGAGAGGGTATATTTGTAATGCCAACTGAACGCATCACTATCCTGTCATCATATTACTATGACACAGAGACAGAAAATTGTGAACAAGACAGATCAATCTTGAAGCGCAGGCTATCTGCATCAGCTGTTGAAGTTGAAAGACAGAGGATGAAATGCTTCCCCTGA 681 0.4112 MWSRGFSVLIKGCLLLVLISVISGLEPELGSTRVVFQTNYGDIEFGFFPSVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVINGRSAPMNEEQKREAEKTVVGEFSEVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHLDGKYAIFGRVTKGDETLTKLEQLPTRREGIFVMPTERITILSSYYYDTETENCEQDRSILKRRLSASAVEVERQRMKCFP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3842g00033 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Gabi3842g00033 226 CDD cyclophilin 35 188 - -
Gabi3842g00033 226 SUPERFAMILY Cyclophilin-like 32 193 IPR029000 -
Gabi3842g00033 226 Gene3D - 24 199 IPR029000 -
Gabi3842g00033 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Gabi3842g00033 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Gabi3842g00033 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Gabi3842g00033 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Gabi3842g00033 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 13 226 IPR044233 -
Gabi3842g00033 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3842g00033 34 189 U-box Gene Family AT5G67530 28.750 5.48e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3842g00033 - - gmx:100819238 408.683