Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi383g00005 ATGGCAGAAGAGGAATCAAAGCCTCTGAACTATATTCCAGAGGTTATATTAAAGAAGAGGAAAAGCGGCGAAGCATGGGCTTTAAGGAAAAAGGAGCAATTCCAGCAGAAAAATTTCCAGTCCAAGAAGTCCAAGGACTTCATCAAGAAGCCCGAGGATTTCGTTTTTGAATATCGCAATAGGGAGGTGGATCTTATAAGGATGAAACGGAGGGTCAAGAGGAAACTACCAGAACTATTGACCACAAACTCCAAGCCCTTAATAATCATTCGGATACAGGGGAAAAGAGACATGCATCCGAAAACCAGAAAGGTCCTGTACAGCTTGGGGTTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGCCAACTGAGGGGGTAATGGCTAAGCTGCAGAGAGTGGAACCATATGTTACCTATGGGTAA 423 0.435 MAEEESKPLNYIPEVILKKRKSGEAWALRKKEQFQQKNFQSKKSKDFIKKPEDFVFEYRNREVDLIRMKRRVKRKLPELLTTNSKPLIIIRIQGKRDMHPKTRKVLYSLGLRRIFSAVFVKPTEGVMAKLQRVEPYVTYG 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi383g00005 140 FunFam 60S ribosomal protein L7 87 140 - -
Gabi383g00005 140 Gene3D - 87 140 IPR036919 -
Gabi383g00005 140 Pfam Ribosomal L30 N-terminal domain 12 75 IPR012988 -
Gabi383g00005 140 Pfam Ribosomal protein L30p/L7e 87 137 IPR016082 -
Gabi383g00005 140 PANTHER 60S RIBOSOMAL PROTEIN L7 9 140 IPR039699 -
Gabi383g00005 140 SUPERFAMILY Ribosomal protein L30p/L7e 88 140 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi383g00005 Gabi-Chr383 138550 139734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi383g00005 1 140 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 52.482 2.20e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi383g00005 K02937 - gmx:100306107 209.149