Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi383g00003 | ATGGTGGTAATAGAGCATGAAGAGAGTGAGGATCGTAACGCGAAACCCTCCAATGCTGGAGCCGGCAACGAAGCTTCCGACGGCTTCGAAACCGCCAGCGACGCCGATCTCGGAAGCGACGGCGAAGAAGGCGGAGCTAGCAGCCGGAAAGAACAGGAGCATGGTGAGCAACACCAGCATCAGCAGACAGAGCAGGAGCAGGAGCAGGGTGTTGCTCTAAGAAGCGATTCGTCCGAGGATGCTTCGGTCAATGAGGAGGAAATGAGACAGAAAGCATTGGTTCAAGCAAATGTAGCAAAGGCAGAAGGTAACAGATGTTTTGTAGATGGGAAGTATGAGGAGGCATTATCACAATATGAACTTGCTTTACAAGTTGCACCAGACATGCCTTCATCTGTGGAAATACGCTCTATATGCCATGCAAATCGTGGTGTGTGCTTCCTGAAACTGGGAAAATATGAAAACACAATAAAAGAATGCACAAAAGCATTAGAACTGAATCCTGCGTATGTTAAAGCTTTGGTAAGAAGAGGAGAGGCTCATGAAAAGCTTGAGCATTTTGATGAGGCCATTGCTGATATGAAAAAAATCTTGGAACTTGATCCCTCAAATGATCAAGCTGGGAAAGTCATTCGCAGGCTAGAGCCCCTTGCTGCAGAAAAACGGGAAAAGATGAAGGAAGAAATGATTGGAAAACTTAAAGATATGGGCAATTCTGTCTTGGGCCGCTTCGGGATGAGTGTAGACAATTTTAAGGCAGTCAAAGATCCAAACACTGGTTCCTATTCTGTCTCATTCCAACGCTAA | 807 | 0.461 | MVVIEHEESEDRNAKPSNAGAGNEASDGFETASDADLGSDGEEGGASSRKEQEHGEQHQHQQTEQEQEQGVALRSDSSEDASVNEEEMRQKALVQANVAKAEGNRCFVDGKYEEALSQYELALQVAPDMPSSVEIRSICHANRGVCFLKLGKYENTIKECTKALELNPAYVKALVRRGEAHEKLEHFDEAIADMKKILELDPSNDQAGKVIRRLEPLAAEKREKMKEEMIGKLKDMGNSVLGRFGMSVDNFKAVKDPNTGSYSVSFQR | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi383g00003 | 268 | SMART | tpr_5 | 96 | 129 | IPR019734 | GO:0005515 | |
Gabi383g00003 | 268 | SMART | tpr_5 | 137 | 170 | IPR019734 | GO:0005515 | |
Gabi383g00003 | 268 | SMART | tpr_5 | 171 | 204 | IPR019734 | GO:0005515 | |
Gabi383g00003 | 268 | ProSiteProfiles | TPR repeat profile. | 137 | 170 | IPR019734 | GO:0005515 | |
Gabi383g00003 | 268 | MobiDBLite | consensus disorder prediction | 43 | 63 | - | - | |
Gabi383g00003 | 268 | Coils | Coil | 84 | 104 | - | - | |
Gabi383g00003 | 268 | Pfam | Tetratricopeptide repeat | 139 | 169 | IPR001440 | GO:0005515 | |
Gabi383g00003 | 268 | Pfam | Tetratricopeptide repeat | 172 | 204 | IPR013105 | - | |
Gabi383g00003 | 268 | ProSiteProfiles | TPR repeat profile. | 96 | 129 | IPR019734 | GO:0005515 | |
Gabi383g00003 | 268 | SUPERFAMILY | TPR-like | 96 | 211 | IPR011990 | GO:0005515 | |
Gabi383g00003 | 268 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 4 | 268 | - | - | |
Gabi383g00003 | 268 | Gene3D | Tetratricopeptide repeat domain | 54 | 232 | IPR011990 | GO:0005515 | |
Gabi383g00003 | 268 | ProSiteProfiles | TPR repeat profile. | 171 | 204 | IPR019734 | GO:0005515 | |
Gabi383g00003 | 268 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Gabi383g00003 | 268 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi383g00003 | Gabi-Chr383 | 112437 | 118053 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi383g00003 | 96 | 227 | Calmodulin-binding Proteins | AT3G25230 | 39.286 | 1.11e-15 | 74.7 |