Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3838g00059 ATGTTGAAGTCGTTAAGGAAAAGCCTAAGCCTTCAATGGAATTGTATCAAGCACAAGAGTGAAGTTGATAGTACTGTGTCAGTGCATGGTGAAAACTTGGTTGTTTTACCTGTGCAGTGGGCAAAGTGCAATGTTTGCTTAGAGGAAAACAAACAACACAATTGTGACCACATCAATGTTGAGGATATAAAGAGTACTGCTGCAGAAGGTGCCAAGCATGATGCTAACGCCAATAGTTCTTTTGCTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAATTGTCAACTCCATATGCTATAGAAAAAGGAGGTTGGGCATCTGCATTCTTGCTTATTGGACTTGGGGGGATGTGTGCTTATACTTCTCATATACTTGGAAAATGCCTTGAAAGGAATCCAAAGTTGACAAGTTATGTGGATATTGGGAATCATGCATTTGGAGCAAAAGGAAGATTCCTAGCTGCAACATTCATCTACTTGGAAATCTTTATGGCCCTTGTTTCCTACACCATCTCATTACACGACAACTTGATCACAGTCTTTTTAGGGACGCATGTGAACATGCACTTGGCTAAATTTTCTACATCCCAACTCCTTACCATGGTGGCAGTGTTGATTTCCCTGCCTAGTTTGTGGATCAGAGATCTTTCTTCCATTTCTTTCCTTTCAACTGTTGGCATTCTCATGTCTCTACTCATTTTTGTATCTGTAGCAGCCACTGCAATTTTTGGAGGTGTCCAAGCTAATCATAGCATACCTCTCCTCCAGCTCCATAATATTCCATCAGTATCTGGTCTTTATGTCTTCGGCTATGGAGGACATATTGTTTTCCCTGATTTATATAAAGCCATGAAAGACCCCTCAAAGTTTACCAAGGTGTCTATTGTGAGCTTCACAATAGTTACAGGACTTTATACAACATTGGGTTTCATGGGTGCAAAAATGTTTGGGAATGATGTCTACTCTCAGATAACTCTAAGCATGCCACCAAAGGAAATTGTAACAAAGATTGCTCTGTGGGCAACCGTTTTGACTCCTATGACAAAATATGCTCTTGAATTTGCACCATTTGCAATTCAGCTGGAGCATAAGCTTCCAAGTTCAATGAGTAGCAGGACAAAAATGGTAATTAGGGGCTGCATAGGTTCAATTTTTCTTTTGGTCATACTTGGCCTTGCTCTGTCAGTGCCATATTTTGAGCATGTACTCAGCCTCACTGGTTCCTTGGTTACTGTATCCATTGTTTTGATCTTGCCATGTGTTTTCTACTTGAAGATTTGTTGGGGTCAAATTCCAAAGCCTCTCTTAGTCCTAAACCTGTGTCTCATAACATTCGGGTTTGTTCTTGGGGTGATAGGCACCATTTCTTCCTCGAAGTTACTACTGAAAAGTTTTCAATCACGCCACTCAACTTGA 1428 0.4097 MLKSLRKSLSLQWNCIKHKSEVDSTVSVHGENLVVLPVQWAKCNVCLEENKQHNCDHINVEDIKSTAAEGAKHDANANSSFAHAVINMVGMLIGLGQLSTPYAIEKGGWASAFLLIGLGGMCAYTSHILGKCLERNPKLTSYVDIGNHAFGAKGRFLAATFIYLEIFMALVSYTISLHDNLITVFLGTHVNMHLAKFSTSQLLTMVAVLISLPSLWIRDLSSISFLSTVGILMSLLIFVSVAATAIFGGVQANHSIPLLQLHNIPSVSGLYVFGYGGHIVFPDLYKAMKDPSKFTKVSIVSFTIVTGLYTTLGFMGAKMFGNDVYSQITLSMPPKEIVTKIALWATVLTPMTKYALEFAPFAIQLEHKLPSSMSSRTKMVIRGCIGSIFLLVILGLALSVPYFEHVLSLTGSLVTVSIVLILPCVFYLKICWGQIPKPLLVLNLCLITFGFVLGVIGTISSSKLLLKSFQSRHST 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3838g00059 475 PANTHER AMINO ACID TRANSPORTER 71 458 - -
Gabi3838g00059 475 Pfam Transmembrane amino acid transporter protein 78 459 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3838g00059 Gabi-Chr3838 515143 517311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3838g00059 43 473 Amino Acid or Auxin Permease AAAP Family AT5G16740 62.877 2.48e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3838g00059 - - lang:109342470 714.146