Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3838g00034 ATGATTCCAACACTTGTTTCTTCTTGTTCTTGGTCACTTGTTACTCTCTTTCTCTCCACTTTCCTACCCCTCCTCGCTATCTCCCTTAACTACTGGCTTGTTCCCGGAGGTTATGCTTGGAGGAATTATTACAACCGTTACAAAAAACACTACTACACAAAACTCCCTGGTCCTATAGGGTGGCCCATACTAGGTACTTTACCTGAGATGGGTTCTCTGGCTCACAGAAAACTCGCTACCATGGCTAATTCACTCAACGCGAAGAGACTCATGGTGCTGAGTTTGGGAACAAACCCTGTTGTTATCAGTAGCCACCCTGACACTGCGAGAGATATTCTATATGGTTCATCCTTCTCTGACCGTCCTGTCAAAGAATCAGCACGTGTTCTCATGTTTGAGCGTGCCATTGGTTTCGCTCCTTATGGGAATTATTGGCGCCATCTTCGTAAGGTTGCAACCACCCACATGTTCTCTCCGAGGGTCATTTCCGGCTTGGAGAGCCTTCGGCAACATGTGGCTGCTGAAATGGTGATGAGAACGTTGAAGGAGATGGGAGACAAAGGTGTAGTTGAAGTTCGAGGGATATTGCATGAAGGGTCTCTAAGCAATGTTTTGGAGAGTGTGTTTGGTACTAATAATTCTTCTATGAGTTCGGAAACGAAGGATGTGTTGAGTGATATGGTTAAGGAAGGTTATGACTTGATTGGAAAGTTTAATTGGGAAGACTATTTTCCTTTCAAATTTTTGGACTTTCATGGTGTGAAGAGAAGGTGTCACAATTTGGCGGCTAAGGTCAATGACGTGGTGGGTCAAATTGTGGAAGAAAGAAAAAGATGTGGTGAGTTCGTTGGACAGAATGATTTTCTTAGCGCTTTGTTATCGTTGCCCCATGAGGAAAGGTTATGTGATTCGGATATAGTGGCTATTTTGTGGGAAATGATATTTAGAGGAACAGACACGGTTGCTATGCTCCTCGAATGGATTATGGCCATGATGGTGTTACACCAAGACATTCAAATGAAAGCCCGCCAAGAGATTGACACGTGCGTCGGCCTAAACGGTCACGTGCGAGACTCAGACATTCCAAACCTTCCTTACCTCCAAGCCATAGTCAAGGAAGTTCTACGGTTGCACCCACCGGGCCCATTATTGTCATGGGCTCGTCTTGCAATCCATGATGTCCACGTGGACAAGGTCATGGTCCCAGCTGGCACGACAGCGATGGTTAACATGTGGGCCATAACACATGACTCTTCCATCTGGGATGACCCATGGGCCTTTAAGCCCGAACGGTTCATGAAAGAAGATGTATCTATAATGGGGTCAGACCTGAGACTCGCACCATTCGGTGCAGGACGTAGGGTTTGCCCGGGAAAAGCGTTGGGCTTAGCTACGGTTCATCTTTGGCTTGCAAAGCTTCTACAACATTTCATATGGCTTCCAGTGAAGCCTGTGGATCTTTCAGAATGCCTCAAGCTCTCCCTCGAAATGAAAAAACCTTTACGATGCCAAGTTATTTGTAGACGCATAACACCGAAAAGCCAGTGCGAATGCAATGCTTGCTGTGAGAACTTATCGCTTTTGATTTCCATGTCAGGGTTTTTGTGTGATTTCAATGTGAAGGTTGGGTTTCAGCTGTTCCTCGTTCTGTTTGGTGCTCAAATTTTGGATACTTATATGGCAATTGGTGCTGGATGGTTGTTTTGTCGTGCTTTGGGATTTTCTGAGTTTCAGCTTGTTTATTTTGAGATACTCCGATGCAGGGTATATAGAGTTAGGTTGATTCGATAG 1791 0.4528 MIPTLVSSCSWSLVTLFLSTFLPLLAISLNYWLVPGGYAWRNYYNRYKKHYYTKLPGPIGWPILGTLPEMGSLAHRKLATMANSLNAKRLMVLSLGTNPVVISSHPDTARDILYGSSFSDRPVKESARVLMFERAIGFAPYGNYWRHLRKVATTHMFSPRVISGLESLRQHVAAEMVMRTLKEMGDKGVVEVRGILHEGSLSNVLESVFGTNNSSMSSETKDVLSDMVKEGYDLIGKFNWEDYFPFKFLDFHGVKRRCHNLAAKVNDVVGQIVEERKRCGEFVGQNDFLSALLSLPHEERLCDSDIVAILWEMIFRGTDTVAMLLEWIMAMMVLHQDIQMKARQEIDTCVGLNGHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVMVPAGTTAMVNMWAITHDSSIWDDPWAFKPERFMKEDVSIMGSDLRLAPFGAGRRVCPGKALGLATVHLWLAKLLQHFIWLPVKPVDLSECLKLSLEMKKPLRCQVICRRITPKSQCECNACCENLSLLISMSGFLCDFNVKVGFQLFLVLFGAQILDTYMAIGAGWLFCRALGFSEFQLVYFEILRCRVYRVRLIR 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3838g00034 596 Pfam Cytochrome P450 56 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gabi3838g00034 596 Gene3D Cytochrome P450 41 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PANTHER CYTOCHROME P450 78A7-RELATED 12 508 - -
Gabi3838g00034 596 FunFam Cytochrome P450 78A5 47 508 - -
Gabi3838g00034 596 SUPERFAMILY Cytochrome P450 56 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3838g00034 596 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3838g00034 Gabi-Chr3838 245201 260986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3838g00034 10 510 Cytochrome P450 AT1G13710 52.745 1.46e-179 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3838g00034 - - ccaj:109797962 855.129