Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3838g00031 ATGGTTATGGCGGAGGAAGAAGAGAACGCAGTGTCGATTCGACCCGAATTCCCAAATGGTCGAGTGAAGAAGATAATGAGGCTGGACAAGGACGTGGAGAGGGTGAGTTCAGAAGCGTTGTTCCTGGTGTCGAGCTCCACGGAGCTGTTCCTACAATTTCTGGCTGAAAAGTCAGCGCGTGTTGCCATTGAGAAGAAACGCAAGACCGTGAAGCTCGAGCATATAAGAATCGCTGTGAAGAGGCACCAGCCAACCAGTGATTTTCTCCTCGATTCGCTTCCGCTACCTTCTCAGCCCGCTAAATCCGATAAGCCTGATATGGATCGGGCCAAACCCGATAAGCCCGCTCCGGCTGGTACTCGCCGCATCGATAATTTCTTCCGAAAGCCAGAAGCTGAAGCCCAAGCGCCGGTGCCCGTAGATGAGTCTTAG 432 0.5278 MVMAEEEENAVSIRPEFPNGRVKKIMRLDKDVERVSSEALFLVSSSTELFLQFLAEKSARVAIEKKRKTVKLEHIRIAVKRHQPTSDFLLDSLPLPSQPAKSDKPDMDRAKPDKPAPAGTRRIDNFFRKPEAEAQAPVPVDES 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3838g00031 143 MobiDBLite consensus disorder prediction 88 143 - -
Gabi3838g00031 143 MobiDBLite consensus disorder prediction 102 129 - -
Gabi3838g00031 143 FunFam Nuclear factor Y, subunit C13 3 94 - -
Gabi3838g00031 143 SUPERFAMILY Histone-fold 16 95 IPR009072 GO:0046982
Gabi3838g00031 143 Gene3D Histone, subunit A 1 94 IPR009072 GO:0046982
Gabi3838g00031 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 16 79 IPR003958 -
Gabi3838g00031 143 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 104 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3838g00031 5 136 CCAAT-HAP5 Transcription Factor Family AT5G43250 65.909 5.83e-55 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Gabi3838g00031 CBFD_NFYB_HMF 4.3e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3838g00031 - - ccaj:109814845 193.356