Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3838g00018 | ATGCCGCAATCAGAAAAATCGCTCGGCATACCAGGAGATGGTAGATGTTTGTTTAGATCTGTGGCCTATGGTGCCTGCCTCAGAACAGGGGAACCATCTCCAAGTCTCAGCAGGCAAAAAGAACTCGCAGATGAGCTCAGAGCCAGAGTTGTAGACGAATTCATTAAAAGGAGGGAAGACACTGAGTGGTTTCTTGAGGGTGACTTTGACACCTATACGGTACAGATGCGAAAACCTCACATATGGGGAGGAGAGCCTGAACTTCTCATGTCCTCACATGTTTTACAGATGCCTATAACAGTGCTCATGCAGGATAACAATTCAAGTAACCTTAAAGTTATAGCTGAATACGGTCAGGAGTATGGTAAAGATAACCCAATTCGAGTCATCTTTCATGGTTATGGCCACTATGATGCATTGAAGAGTTCAACTGGTTATATGCAGTCTTAG | 450 | 0.4422 | MPQSEKSLGIPGDGRCLFRSVAYGACLRTGEPSPSLSRQKELADELRARVVDEFIKRREDTEWFLEGDFDTYTVQMRKPHIWGGEPELLMSSHVLQMPITVLMQDNNSSNLKVIAEYGQEYGKDNPIRVIFHGYGHYDALKSSTGYMQS | 149 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3838g00018 | 149 | PANTHER | HIV-INDUCED PROTEIN-7-LIKE PROTEASE | 10 | 142 | - | - | |
Gabi3838g00018 | 149 | SUPERFAMILY | Cysteine proteinases | 9 | 141 | IPR038765 | - | |
Gabi3838g00018 | 149 | FunFam | OTU domain-containing protein | 2 | 146 | - | - | |
Gabi3838g00018 | 149 | Gene3D | - | 3 | 147 | - | - | |
Gabi3838g00018 | 149 | Pfam | OTU-like cysteine protease | 11 | 137 | IPR003323 | - | |
Gabi3838g00018 | 149 | CDD | OTU_plant_OTU4-like | 9 | 140 | - | - | |
Gabi3838g00018 | 149 | ProSiteProfiles | OTU domain profile. | 5 | 143 | IPR003323 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3838g00018 | Gabi-Chr3838 | 124823 | 126940 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3838g00018 | 10 | 143 | C2H2 Transcription Factor Family | AT1G50670 | 27.407 | 4.42e-06 | 42.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3838g00018 | K18342 | - | gmx:100792132 | 271.937 |