Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3838g00015 ATGACAGTGTTGGTGAATTGTGGTGCGGGGTTTAATAAAAAGGTTTCTCCCATTGAGTATGAAACAGAGGCGTCACAGCGTCTCGTAGATGCTGCAAATTACGGGGACACAGACTCTGCCTTCGCATGTGTCGCGAATCACTTTGTGGACCTGAACTTCGTCGGAACGGTGTCGTTGAAGTCCAAAACGACGGAGATCGTGCTGCAAGACGGGTTGCCTCACCAAGTTCTGTTTGGGTACGAGGAGTTCAAAACCGAGGTCACTGCTCTGTTCTTGGCTGCGCATAATGGGAATTTGACACTCCTCCGCAAGCTATTGCGTGCTGGAGCTAGTGTAAATATGAAATTGTTCCGGGACTATGCCACAACAGCTTCAGTGAGGGAAGGCGATCTAAAAGTATTGGAAGTCCTTATCAATAATGGGGCATCACAAATTGCATGTGAGGAGGCTTTAATGGAATCAAGCCACTTTGGACGGCCCAGATTTGCTGAACTACTCATGCAGTCTGACATGATCCGTCCTGAAGTTGCAGTTCATGCCCTTGTATCTGCTTGTTGCAGAGGCTTCGTTGAGGTTGTTGATGTACTCATCAAGCACGGAGTGGATGCCAATGCAATTGATAGAACTTTGCTTCAATCTTCAAAGCCATTTCTTTACGCTAATGTTGATTGCAATGCATTATTTGCTGCCGTTGTCAGCAGACAGATTAATGTTGTCAGATTACTCTTGCAGGTTGGGGTACGGCGTGATATCAAGGTGAAACTGGGGGCATGGTCATGGGAAACGGATACAGGAGAAGAATCTCGTGTAGGTGTTGGACTAGCTGAGGCATATCCAATCACGTGGTGTGCTGTGGAGTATTTTGAATCCACAGGTTCCATATTGAAAATGCTACTCTGCCCCTGCTCGCTTAATAGTTGGCATATTGGGAGGACTCTCTTGCACCATGCCATCGTTTGTGACAATGAAAAAGCCGTAACTATACTTCTAAATAGTGGTGAATTTACTGAATTGGCAGTGCAAACTACTGAAGAAACCAATGTACACCCTATTCACATGGCTGCAAGGTTTGGATCATGTAACATTCTTAAAAGCCTGATTAATGCTGGTTGTAACTTGGACTCCCAAACAAAATCTGGAGATACAGCATTGATGATCTGCATAAGGCATAAACATGAGGAGTGCCTTAGAGTCCTAGCATCAGCAGGTGCTGATTTGGGATTGGTAAATTCATTTGGTCAATGTGCAACTTCAATTGCAAACTCTCTTCAGTGGACTGAAGTCTTCCATAAAGTAATTTTGGATGTTATCAGAGCCAGAAAGGTTGTTAAATCAAGCAATGCCTCTAGATTTTCTGCTTTGTTATTTGTAACTCAAGCAAACAATATAAAGGGTTTGAAGAGACTCATTGAAAACAAGAACTTGGATATAGATGAGCAAAATGGCAATGGATTTTCAGCTGCAATGATAGCTGTTGCAGATGGTAGTGTAGAGGCTTTCAAGTTGCTACTTTATGCTGGTGCTGATGTAGCTAAGCTTAAAAACAAGAATGGTTTGACAGCACTTGATCTCATAGAAATGAACCCAAATGAGGAAGTGTTTCACAAGGTGATAATTAAATATGCATTGAAAAAGGGACGCAATGCTTCCATTGAGATGAAACCTCTCCACATTGCAGCTCGCTATGGGGACATAGATAGTGCTCATAAACTATTAAATGAAGGGTACGATGTTAATGCTTTGGATGGACATGGATATACCCCATTGATGCTAGCGGCAAGAGGATGCCATGTTGATATGTGTAAGCTTTTGCTCTCACATGATGCCAAATGTTATATTGAGAATGAGAAACATGAGACAGCACTTTCACTTGCTAGAGAAAATGGTAGAGGAAATGATGCTGAGCGTGTGATAATGGATGAGCAAGCTCGAAGATTAGTGTTGTATGGGGCTAATGTGATGAAGCATACAAAGTGTGGTAAAGGGTCACCTCATAGCAAGGTACTGGTAATGGTGGAGGATGCTGGAATTCTAAAATGGGGAAAATCAAACAAGAGAAAAGTGGTTTGTAAAGAGGCTGTGGTTGGAACAAGTAAAAGTTTTCGATGGAACCGCAGAAAAAAGTTTGATGTTGATGACCCAGGAATGTTCCATGTAATAACTACAGAAGGTAAGCAGGTTCATTTTGTATGTGAAGGTGGGATTGAAATGGCTGAGATGTGGGTAAGGGGGATTAGATTAGTGACAACAGAAGCTATTTTTGGCAGAAAAAGATGA 2277 0.4251 MTVLVNCGAGFNKKVSPIEYETEASQRLVDAANYGDTDSAFACVANHFVDLNFVGTVSLKSKTTEIVLQDGLPHQVLFGYEEFKTEVTALFLAAHNGNLTLLRKLLRAGASVNMKLFRDYATTASVREGDLKVLEVLINNGASQIACEEALMESSHFGRPRFAELLMQSDMIRPEVAVHALVSACCRGFVEVVDVLIKHGVDANAIDRTLLQSSKPFLYANVDCNALFAAVVSRQINVVRLLLQVGVRRDIKVKLGAWSWETDTGEESRVGVGLAEAYPITWCAVEYFESTGSILKMLLCPCSLNSWHIGRTLLHHAIVCDNEKAVTILLNSGEFTELAVQTTEETNVHPIHMAARFGSCNILKSLINAGCNLDSQTKSGDTALMICIRHKHEECLRVLASAGADLGLVNSFGQCATSIANSLQWTEVFHKVILDVIRARKVVKSSNASRFSALLFVTQANNIKGLKRLIENKNLDIDEQNGNGFSAAMIAVADGSVEAFKLLLYAGADVAKLKNKNGLTALDLIEMNPNEEVFHKVIIKYALKKGRNASIEMKPLHIAARYGDIDSAHKLLNEGYDVNALDGHGYTPLMLAARGCHVDMCKLLLSHDAKCYIENEKHETALSLARENGRGNDAERVIMDEQARRLVLYGANVMKHTKCGKGSPHSKVLVMVEDAGILKWGKSNKRKVVCKEAVVGTSKSFRWNRRKKFDVDDPGMFHVITTEGKQVHFVCEGGIEMAEMWVRGIRLVTTEAIFGRKR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3838g00015 758 Gene3D - 536 645 IPR036770 -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Gabi3838g00015 758 Coils Coil 463 483 - -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Gabi3838g00015 758 Gene3D - 169 262 IPR036770 -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat region circular profile. 584 609 - -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Gabi3838g00015 758 Gene3D - 434 535 IPR036770 -
Gabi3838g00015 758 PANTHER ANKYRIN REPEAT-CONTAINING 17 734 - -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Gabi3838g00015 758 SUPERFAMILY Ankyrin repeat 310 637 IPR036770 -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Gabi3838g00015 758 Pfam Ankyrin repeats (3 copies) 556 635 IPR002110 GO:0005515
Gabi3838g00015 758 Pfam Ankyrin repeats (3 copies) 284 375 IPR002110 GO:0005515
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Gabi3838g00015 758 SUPERFAMILY Ankyrin repeat 21 256 IPR036770 -
Gabi3838g00015 758 SMART ANK_2a 117 147 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 309 337 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 85 114 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 176 205 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 584 613 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 222 253 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 379 408 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 483 512 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 551 580 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 346 375 IPR002110 GO:0005515
Gabi3838g00015 758 SMART ANK_2a 449 479 IPR002110 GO:0005515
Gabi3838g00015 758 Pfam Ankyrin repeat 380 410 IPR002110 GO:0005515
Gabi3838g00015 758 Gene3D - 301 433 IPR036770 -
Gabi3838g00015 758 ProSiteProfiles Ankyrin repeat region circular profile. 346 374 - -
Gabi3838g00015 758 Pfam Ankyrin repeats (many copies) 460 504 IPR002110 GO:0005515
Gabi3838g00015 758 Gene3D - 14 168 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3838g00015 Gabi-Chr3838 100601 121973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3838g00015 353 535 Ion Channels AT2G25600 29.101 1.05e-06 50.4