Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3838g00010 ATGGCGGCTGGTGGACATGGAGGTTATAGCGAAAACGAGTTGAGGGAGCGTGAGTCCAATTTTGATGTTTCAAGACGTGGTGTTAGTAATAATTCTAGAGAAAAGTATGATAGGATTAGGAATGGTAGCCGCGATGTTGCGAGGGTTGGGAACAAGGATGCAAGAGATAGGATTAGACCGAGACAGAAAGATATTAGATTGAGAGAAGCTTCGAATGGCAGTTACCGGTCATCATCGAGTGGGAGTGACTCGGGCTCCGGCGGCAGTGGCGGGCTTGGGCCAAGACGATGTGGGTTTTCTGTTAAGACTATGGACAGAGAACCAGGTGAGCTTTCTAGTGAGAGTGGGTCTGATGATGCAATTGAATCAGAATCAGTGGTGAAATACTGTGAGGTTGCAAGGGGTGAAGAAAACGGGACTCAATCTCCACTAGACAGGAAAAGAAAATTTTCACCAATAGTGTGGGATAAGGATGATGAAGAAGTGAATGATTTATGCAAACATAGGGTAGCTACAACAGTGACTGCTCTTCCCCCTCCATCCCCAGTTTCTAGAGTAATCCGTCAGTCAGCTAATGTTCCTTACAATGGAGTTGAAATTCATCCTGTACAAAACAGAGAAGCTGAGAGTATTGAGTTGCCGACTGGTACTAATTCTTCATTGATGTCTGAGTCAATTAAAGATGCTGAATCTGAGTCTCTTGCAGGTTTGCATTCATTTTTGCCTGAGCAGAGGTTGGGTAATGAGCCGGAAGCTGAGCTATCAGAAGGTGAGGATTATGTTCCAACTCATAATATATTATCTTCAAGATGGGCAGCTGGAGATAACTCTCCCGTTGATGAAGGTGAAATCAATGATGTCAAGGAAATCCTTAAATCGAGGAGGAGGCTCTCTCCTGAGCTGGGTACGAGAGTAAGAACCAAGATGTTGAGACCAGAGGAATCTAAAATAGAAGGTTTTGAAGGGGTTAGATCTATATCATCTGAATCTGAAGAAAGAGGTAGCGGAGGGAGATCGTCCAGTGGAGATGATCAATCGGAGAAGGATGACTATATGGAGATTGATGGTCAAGGTTGCAACAGTGAAACTAGTAGTAATCACTCAGATACAGACTCTGAAGATGAAGATGATAGCCGGAAAACTCCAGAACCTCCGGCTCCGGCACAAAGAGTTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAATTTGAGAGACTGAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCCAAAGATAAGAAGACTGGGGAAATTGTGGCATTGAAGAAAGTGAAGATGGAGAAGGAAAAAGAAGGCTTTCCCCTGACTTCTCTTAGAGAAATAAACATTCTTCTTTCCTTTCACCACCCATCAGTAGTTGACGTTAAAGAAGTGGTGGTAGGGAGTAGCCTTGACAGTATTTTCATGGTAATGGAATACATGGAACATGATCTTAAAGGATTAATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTTTTGGAAGGTGTGAAGTATCTTCATGACAACTGGGTTCTTCATAGGGATTTGAAGACGTCAAATCTGCTTCTGAATAATCGGGGTGAGTTAAAAATTTGTGATTTTGGATTGGCTCGGCAGTATGGGAGTCCATTGAAACCATATACACACCTTGTAGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTCTGGGGACAAAACAGTATTCGACAGCCATTGACATGTGGTCTCTGGGTTGTATAATGGCTGAACTTTTGTCCAAGGAACCACTATTTAATGGGAAGGCTGAATTTGATCAACTTGACAAGATTTTCAGAATTCTTGGCACACCAAATGAATCTATTTGGCCTGGGTTCTCAGAATTACCTCGAGTCAAGGTCAATTTTGTCAAGCATCAGTATAATCTCCTGCGTAAAAAGTTTCCTGCAACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGATCCCAAAAAGCGGATCACAGCTGAAGCTGCTCTTAACCACGAGTGGTTTCGTGAAGTTCCCCTTCCTAAGTCTAAAGAATTCATGCCTACATTCCCTGCTCAACATGCTCAAGACAGGCGGATGCGGAGAATATTAAGGAGTCCGGATCCATTAAAGGAGCAGCGACGGAAGGAGTTACAGCAGGGTGAATCAGGGACTGGTGGTATTTTTGGTTAA 2253 0.431 MAAGGHGGYSENELRERESNFDVSRRGVSNNSREKYDRIRNGSRDVARVGNKDARDRIRPRQKDIRLREASNGSYRSSSSGSDSGSGGSGGLGPRRCGFSVKTMDREPGELSSESGSDDAIESESVVKYCEVARGEENGTQSPLDRKRKFSPIVWDKDDEEVNDLCKHRVATTVTALPPPSPVSRVIRQSANVPYNGVEIHPVQNREAESIELPTGTNSSLMSESIKDAESESLAGLHSFLPEQRLGNEPEAELSEGEDYVPTHNILSSRWAAGDNSPVDEGEINDVKEILKSRRRLSPELGTRVRTKMLRPEESKIEGFEGVRSISSESEERGSGGRSSSGDDQSEKDDYMEIDGQGCNSETSSNHSDTDSEDEDDSRKTPEPPAPAQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSVVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKAEFDQLDKIFRILGTPNESIWPGFSELPRVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPKKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRILRSPDPLKEQRRKELQQGESGTGGIFG 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3838g00010 750 PANTHER CELL DIVISION PROTEIN KINASE 402 701 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 1 123 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 10 70 - -
Gabi3838g00010 750 Gene3D Transferase(Phosphotransferase) domain 1 487 727 - -
Gabi3838g00010 750 Pfam Protein kinase domain 404 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 303 389 - -
Gabi3838g00010 750 FunFam Cyclin-dependent kinase G-2 487 726 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 715 739 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 336 355 - -
Gabi3838g00010 750 FunFam cyclin-dependent kinase G-2 isoform X1 389 486 - -
Gabi3838g00010 750 Gene3D Phosphorylase Kinase; domain 1 388 486 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 210 227 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 711 750 - -
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 71 87 - -
Gabi3838g00010 750 SUPERFAMILY Protein kinase-like (PK-like) 396 701 IPR011009 -
Gabi3838g00010 750 CDD STKc_CDC2L1 398 695 IPR045267 GO:0004674|GO:0005524|GO:0006468
Gabi3838g00010 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 206 229 - -
Gabi3838g00010 750 SMART serkin_6 404 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3838g00010 750 ProSiteProfiles Protein kinase domain profile. 404 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3838g00010 750 MobiDBLite consensus disorder prediction 303 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3838g00010 Gabi-Chr3838 74496 83754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3838g00010 395 741 Core Cell Cycle Gene Families AT5G10270 45.067 2.16e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gabi3838g00010 Pkinase 1.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3838g00010 K08818 - gmx:100793729 1119.76