Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3838g00003 ATGGAAGAGGAAATCAAGTCAGAATTCAAAAAAAGCGGGTTCGATCTTGAGGAAGAAGAAGAAATAATGAACAAATGTCTAACTTTCTGCATCAACTACAGTCTCAGCGCTTCCGATCTCGTCTCAAGCTGGGAGGTTTATTATCTGAATAGACAGCTGAATGAACCAACGGTACAAAATGCTGAAATGGATGGCTTTTTGCTGCATTTACAAAATAAGAAGAAAGAAGATGTTGTAAAGGAGGAAGTTGGTTTGCATACTTACTCTATCAGAGATGTAGAAATGATCTTAAATAATGATGACGATACAAAGGATAATACTCCTGGAACTCCATCAGATCATCATCAAGATCTTTATTCACCTGTACATGATACATCTTTAATGTATGGGAATAATTTATCTTCTGGAAAACCATCAAAACTAGAGACACCCTTTTCAAAGCGGACAGATAGGTTTGCAGTGAAATTTAGCATCAACACTATGCCTGATGTAGAGAATGGAGAACAAGAACCTAATCATGAGAATGCTGAGAATGATGAGGACGATGTTGTCAGGAAAGTTGTACCCCGGAAAAGATGTTCATTGGTGGTTCATGGATCAGAGCCCAAACCAGATTGCAGATTCATGTATGATAGGACCGAGGATAGGGTTAAGGCAGTAGAAAATCGTATTAGGAAACATACAAGGGCACTTGTAGCTTCTGGGCTGTATGAAGAACCAACGGATCCTACAATTGCTTCACAGAGAGGCATTTTTGCCGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTCTAAACGAGAAGTCTGTCATGCTTCAGAGCAGTTTTGAGCATTCTGGAGGGGAATGTGTTCGCCTAGACTTACAACGTTTAAGCCATTTTTCAGTTTTTCCTGGTCAGGTAGTTGGTATTGGAGGGCATAATCCTAGTGGGCATTGCTTAGTTGCATCTAAATTGGTGGATTCTATACCTACCTCTGTTGCTGAGGAGGATTTGAATCCCGCAAAGAAGCAAGCTATTGATAGGGAAAATCAGCCAACTGATCTGCTTTCTAAACAGAGAGATTTATCGATGATTATTGCAGCAGGCCCTTTTACTACCACAGACAATTTGTTGTTTGAGCCTCTTATAGAACTGCTAGCATATGCAAAGCGAAGACCGACACAGTTGCTTGTATTGCTGGGACCATTTATTGACTCTGAACACCCAGACATTAAGAAAGGAACCGTGGACAGGAGCTTTGATGAAATATTTCAGTTTGAAATTCTGAGGAAGTTGGAAGAGTATGTAGAATGTATGGGTTCAGCAGCACGTGTTCTTCTTGTACCATCTATACGGGATGCTAACCACGATTTTGTTTTTCCTCAGCCTGCATTTGATATCAATCTACCTGATCTCAAATCTCAGATAGTCAGTCTCCCTAATCCTGGAATCTTCGAGGCAAATGAGGTCAAAGTTGGTTGCTGCACGGTGGATATTCTCAAGCAGGTGAGTGGGGAAGAGATATCACGGACTGCAAAAGATGGAAAACCTATTGATCGCATGAGTAGACTTGCAAACCATATTCTTAACCAACGAAGCTTCTATCCACTTTACCCTCCGGCAGAAAGTGTTCCCTTGGACTTTTCTCTTGCTCCAGAAGCCCTTCAACTCTCATTGGTTCCAGATGTTCTTATTTTACCCTCAGACATCAAGTACTTTGTCAAGGTACTTAATAGCGAAAGTGAAGGGATGAACCACATCAAATGCATTGCAGTCAATCCTGGAAGACTGGCCAAGGGAGAAGGAGGGGGTACTTTTGTAGAGCTTGATTATTGTGGAGGTCCCGACAAAATTAACGCTTCAATTGTCGGCATTTGA 1860 0.4145 MEEEIKSEFKKSGFDLEEEEEIMNKCLTFCINYSLSASDLVSSWEVYYLNRQLNEPTVQNAEMDGFLLHLQNKKKEDVVKEEVGLHTYSIRDVEMILNNDDDTKDNTPGTPSDHHQDLYSPVHDTSLMYGNNLSSGKPSKLETPFSKRTDRFAVKFSINTMPDVENGEQEPNHENAENDEDDVVRKVVPRKRCSLVVHGSEPKPDCRFMYDRTEDRVKAVENRIRKHTRALVASGLYEEPTDPTIASQRGIFAVGMICCDGEGRLNEKSVMLQSSFEHSGGECVRLDLQRLSHFSVFPGQVVGIGGHNPSGHCLVASKLVDSIPTSVAEEDLNPAKKQAIDRENQPTDLLSKQRDLSMIIAAGPFTTTDNLLFEPLIELLAYAKRRPTQLLVLLGPFIDSEHPDIKKGTVDRSFDEIFQFEILRKLEEYVECMGSAARVLLVPSIRDANHDFVFPQPAFDINLPDLKSQIVSLPNPGIFEANEVKVGCCTVDILKQVSGEEISRTAKDGKPIDRMSRLANHILNQRSFYPLYPPAESVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLNSESEGMNHIKCIAVNPGRLAKGEGGGTFVELDYCGGPDKINASIVGI 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3838g00003 619 MobiDBLite consensus disorder prediction 125 142 - -
Gabi3838g00003 619 Coils Coil 210 230 - -
Gabi3838g00003 619 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 605 IPR016722 -
Gabi3838g00003 619 Gene3D - 510 614 - -
Gabi3838g00003 619 Gene3D - 338 508 - -
Gabi3838g00003 619 FunFam DNA polymerase alpha subunit B 339 504 - -
Gabi3838g00003 619 Gene3D - 1 74 IPR043034 -
Gabi3838g00003 619 MobiDBLite consensus disorder prediction 99 144 - -
Gabi3838g00003 619 FunFam DNA polymerase alpha subunit B 1 76 - -
Gabi3838g00003 619 PIRSF DNA_pol_alpha_2 1 607 IPR016722 -
Gabi3838g00003 619 Pfam DNA polymerase alpha/epsilon subunit B 359 569 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3838g00003 2 619 Core DNA Replication Machinery Family AT1G67630 60.514 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3838g00003 K02321 - gmx:100795306 999.964