LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3837g00075	ATGTCGCTAAAGAGGCGCCCCGATGATGGCAAGACTCCTGATGATAAGCGTAGAAAGCCTCCTCCTTTCTCCAGTGTGGTGCGCGAGGTGATGAAGTTACAATCTGTCAGGAATTTGCTGGAGCCAATTTTAGAGCCCTTGGTTCGTCGAGTGGTTAAGGAGGAAATCGAAGTGGCCCTAAGGAAGCATTTAACCAGCATAAAACAGACCTGTGGAAAGGAGATGCTCACTACTGAGTCAAGAAGTTTGCAGCTGCAGTTTGATAACAACATTTCTCTTCCTGTCTTTACTGGGGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGGATAAGTTTAGTTGATGCCCAAACAGCGAAGATTGTTACTACAGGATCTGAATCTTTAGCTAAGGTAGAAATTGTAGTCCTCGAGGGTGATTTTGAAGAAGAAAGTGACATTTGGACACCTGACGAGTTCAGGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTCCTTACAGGAGATGTAATTTTATATCTTAAAGATGGGATTGGTATGGTGAGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACCGAGGAGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGAAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCTTTAATGTTAAAGATCTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAATATATTGGGTACTGGGATGTCAACAAAGATGTGGGAAATAACTGTGGAGCATGCTCGAACTTGCACACTTGACACGGCGAGGTTAGTGTACTTCCCTTCTCATTCTCAACAGAAATCTGGTGTGGTCGTCAATGCTGTGGGACAAGTGACAGGGCTACTCTCTGAATGCGAGTATGTCCCAGTAGATAAGATGTCTGAAACTGAAAAGGCTGATGCTCAAAACTTGGTTATTTCTGCATATAACCAAGGGGAGACTTTTACCTTTTGTGATGATGAAGGCTCTCTGATGAATGGATCTTCAAAGTTGACTAATGTACTTTACTCCCCAAGTTCTCCGAGGACCGAGGGATCAAGCGCCAACAAGCTTTTGGCTCCTCAAAAGAGTGGGGGATTCAATTACACACAAGCAAGTGCCTCTTCTCCAGATATCATGTCATCCATATATTCTGTTGGAACTAGTGGCTTAGATGACTATTGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCATACTCTTAGTTTTCCAGCCCAAGTCTCCAACTCTTTGATCTGTGACACGGATCCAATGGCCCATGTTTTTAGTGATGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCAGTGCCACATTGAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCGGGCACATTCTACACCCATGGTCAATTGTAAAGCTAAGAGGAGATGGAGAAAGTTATTCAACGTTCTAAAATGGTTCATGGTGAGCAAACGAGGACCCCAAAGATACAGGTAA	1647	0.4335	MSLKRRPDDGKTPDDKRRKPPPFSSVVREVMKLQSVRNLLEPILEPLVRRVVKEEIEVALRKHLTSIKQTCGKEMLTTESRSLQLQFDNNISLPVFTGARIEGEDGSNLRISLVDAQTAKIVTTGSESLAKVEIVVLEGDFEEESDIWTPDEFRSNIVREREGKKPLLTGDVILYLKDGIGMVSEISYTDNSSWTRSRRFRLGARVVDNFDGIRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIFNVKDLLTLLNLDPAKLRNILGTGMSTKMWEITVEHARTCTLDTARLVYFPSHSQQKSGVVVNAVGQVTGLLSECEYVPVDKMSETEKADAQNLVISAYNQGETFTFCDDEGSLMNGSSKLTNVLYSPSSPRTEGSSANKLLAPQKSGGFNYTQASASSPDIMSSIYSVGTSGLDDYCLPNFDSMGLRYDHTLSFPAQVSNSLICDTDPMAHVFSDEDHLQFFDTDLQSQCHIEADLQSAVDSFMRAHSTPMVNCKAKRRWRKLFNVLKWFMVSKRGPQRYR	548

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3837g00075	548	MobiDBLite	consensus disorder prediction	1	23	-	-
	Gabi3837g00075	548	Pfam	Calmodulin binding protein C-terminal domain	315	369	IPR046829	-
	Gabi3837g00075	548	Pfam	Calmodulin binding protein-like N-terminal domain	83	228	IPR046831	-
	Gabi3837g00075	548	PANTHER	OS02G0177800 PROTEIN	16	440	IPR012416	GO:0005516
	Gabi3837g00075	548	Pfam	Calmodulin binding protein central domain	240	306	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi3837g00075	Gabi-Chr3837	623848	629190	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3837g00075	1	365	Calmodulin-binding Proteins	AT5G62570	59.838	4.43e-156	449

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3837g00075	-		-	gmx:100793156	866.685